RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 IFI30P13284 250 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 CTSEP14091 401 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 DRD5P21918 477 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 TAS2R43P59537 309 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 RPS25P62851 125 aaKnown RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 POU4F2Q12837 409 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 BIKQ13323 160 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 DOC2BQ14184 412 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 GLYR1Q49A26 553 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 GALNT12Q8IXK2 581 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 GPALPP1Q8IXQ4 340 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 CMIPQ8IY22 773 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 RPLP0P6Q8NHW5 317 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SLC2A12Q8TD20 617 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 OIT3Q8WWZ8 545 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 TMEM203Q969S6 136 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 TRMT61AQ96FX7 289 aaKnown RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 DIRAS2Q96HU8 199 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 ZNF578Q96N58 590 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SDHCQ99643 169 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 PRSS27Q9BQR3 290 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 KATNB1Q9BVA0 655 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SRRQ9GZT4 340 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SLC22A4Q9H015 551 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SEMA6CQ9H3T2 930 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 CMC2Q9NRP2 79 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 USP36Q9P275 1121 aaKnown RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 PLEKHB1Q9UF11 243 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 ZNF223Q9UK11 482 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SPTY2D1-AS1A0A0U1RR47 76 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TMEM221A6NGB7 291 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RIIAD1A6NNX1 92 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 C10orf142B7Z368 130 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CHP2O43745 196 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TMCC2O75069 709 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 LDB3O75112 727 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CH25HO95992 272 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 IFNGP01579 166 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 MSL3P1P0C860 447 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 GABRG2P18507 467 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 F8A1P23610 371 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 GABRA3P34903 492 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RPS5P46782 204 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TPTEP56180 551 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 SHC2P98077 582 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 HOXC5Q00444 222 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 MXD1Q05195 221 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ASAH1Q13510 395 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 GARNL3Q5VVW2 1013 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 AGAP6Q5VW22 663 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 KIAA0895LQ68EN5 471 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 SMARCD3Q6STE5 483 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF322Q6U7Q0 402 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TMEM92Q6UXU6 159 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF550Q7Z398 422 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TAF8Q7Z7C8 310 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 LHFPL3Q86UP9 236 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RAB43Q86YS6 212 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CPOQ8IVL8 374 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 LAX1Q8IWV1 398 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 VWA5B2Q8N398 1253 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 OR13H1Q8NG92 308 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 OR4C6Q8NH72 309 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 DNAJA4Q8WW22 397 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 BPIFA2Q96DR5 249 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 AGAP4Q96P64 663 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 LMF2Q9BU23 707 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ABCB9Q9NP78 766 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TRIM36Q9NQ86 728 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TOR4AQ9NXH8 423 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 SLC35A3Q9Y2D2 325 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 PRR23D1E9PI22 279 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RFXAPO00287 272 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CLDN4O14493 209 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 BHLHE40O14503 412 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 SLC19A2O60779 497 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 KRT8P05787 483 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TRAPPC2P0DI81 140 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 TRAPPC2BP0DI82 140 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 PRR23D2P0DMB1 279 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 IL7P13232 177 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RNH1P13489 461 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CELP19835 753 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 VSX2P58304 361 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ACTC1P68032 377 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ACTA1P68133 377 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 FABP5Q01469 135 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 MGAT2Q10469 447 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF155Q12901 538 aaPredicted RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 FLYWCH1Q4VC44 716 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 CCNJQ5T5M9 372 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 PRPF38BQ5VTL8 546 aaKnown RBP8.95□□□□□ -0.98
NPHP3-209ENST00000493732 NIPAL3Q6P499 406 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 RTL4Q6ZR62 310 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 ZNF438Q7Z4V0 828 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 C7orf57Q8NEG2 295 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 IL17RDQ8NFM7 739 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 OR4F15Q8NGB8 312 aa8.95□□□□□ -0.98
NPHP3-209ENST00000493732 SLC37A2Q8TED4 501 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms