RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FPR3P25089 353 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 FMO3P31513 532 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TRHRP34981 398 aaPredicted RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 MAP3K8P41279 467 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 GABRA4P48169 554 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 CSNK1EP49674 416 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 EMX1Q04741 257 aaPredicted RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 DUSP2Q05923 314 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 MGAT2Q10469 447 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TSPAN31Q12999 210 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 DUSP5Q16690 384 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 DEFB133Q30KQ1 61 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 UBE2UQ5VVX9 321 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RNLSQ5VYX0 342 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 LYSMD4Q5XG99 296 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 CWF19L1Q69YN2 538 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 PODNL1Q6PEZ8 512 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF730Q6ZMV8 503 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RASSF6Q6ZTQ3 369 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TMPRSS7Q7RTY8 843 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 WDR5BQ86VZ2 330 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 GRAMD2AQ8IUY3 354 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 CROCCP3Q8IVE0 287 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SLITRK4Q8IW52 837 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 FAM26EQ8N5C1 309 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TEX47Q8TBZ9 253 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 FAM168AQ92567 244 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RFKQ969G6 155 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TMIGD2Q96BF3 282 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 Q96M66 194 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TGM7Q96PF1 710 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 ELF4Q99607 663 aaPredicted RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 MCHR1Q99705 422 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 NIPSNAP1Q9BPW8 284 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 NDC1Q9BTX1 674 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 POLDIP3Q9BY77 421 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SYNPO2LQ9H987 977 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 TMEM27Q9HBJ8 222 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SLC25A19Q9HC21 320 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 FAM60AQ9NP50 221 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RASSF1Q9NS23 344 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 RLIMQ9NVW2 624 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 FKBP14Q9NWM8 211 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 C2orf42Q9NWW7 574 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SELENONQ9NZV5 590 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 SRPK3Q9UPE1 567 aa9.3□□□□□ -0.92
PRPF3-206ENST00000493553 LAMA2P24043 3122 aaKnown RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 MN1Q10571 1320 aaPredicted RBP9.3□□□□□ -0.92
PRPF3-206ENST00000493553 IGHV1OR21-1A0A087WYE8 117 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 A0A0A6YYC8 382 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 H3BMQ9 156 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 I3L1I5 382 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 M0R3H8 397 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 OR2B3O76000 313 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 BCL10O95999 233 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 CDK1P06493 297 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF16P17020 682 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 GABRB1P18505 474 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 AGXTP21549 392 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 PCMT1P22061 227 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 POU1F1P28069 291 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 GABRA3P34903 492 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 PDX1P52945 283 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 DCAF7P61962 342 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 EEF1A1P68104 462 aaKnown RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 TUBA1BP68363 451 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 NCF4Q15080 339 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 KLHL22Q53GT1 634 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 TRMT12Q53H54 448 aaKnown RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 C12orf73Q69YU5 71 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 TYW3Q6IPR3 259 aaKnown RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 LAIR2Q6ISS4 152 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF613Q6PF04 617 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 FAM111BQ6SJ93 734 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 TUBA1AQ71U36 451 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF367Q7RTV3 350 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF550Q7Z398 422 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ZNF761Q86XN6 746 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 OR4N5Q8IXE1 308 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 D2HGDHQ8N465 521 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 FRMD1Q8N878 549 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 MORN4Q8NDC4 146 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 RNF141Q8WVD5 230 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 DIO2Q92813 273 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 NAT6Q93015 286 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 MMABQ96EY8 250 aaPredicted RBP9.29□□□□□ -0.92
PRPF3-206ENST00000493553 SLC41A2Q96JW4 573 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 COG8Q96MW5 612 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 SIGLEC11Q96RL6 698 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 CDCA4Q9BXL8 241 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ALOXE3Q9BYJ1 711 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 LHPPQ9H008 270 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ACOT13Q9NPJ3 140 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 CUTCQ9NTM9 273 aa9.29□□□□□ -0.92
PRPF3-206ENST00000493553 ERVK-18Q9QC07 812 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms