RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 AVL9Q8NBF6 648 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM116Q8NCL8 245 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR4K2Q8NGD2 314 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR8K1Q8NGG5 319 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR52K1Q8NGK4 314 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR2T11Q8NH01 316 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 WDR36Q8NI36 951 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 METTL6Q8TCB7 284 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CT55Q8WUE5 264 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 HPSE2Q8WWQ2 592 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GLYATL1Q969I3 302 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TADA1Q96BN2 335 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OMA1Q96E52 524 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MS4A14Q96JA4 679 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC42Q96M95 316 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TSGA13Q96PP4 275 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 OR6C1Q96RD1 312 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MAP3K3Q99759 626 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TREX2Q9BQ50 279 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GPATCH1Q9BRR8 931 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM121Q9BTD3 319 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CLEC7AQ9BXN2 247 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GSDMCQ9BYG8 508 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PAIP1Q9H074 479 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GBA3Q9H227 469 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 MRPL47Q9HD33 250 aaKnown RBP2.66□□□□□ -1.98
PTCD3-218ENST00000493430 FAM60AQ9NP50 221 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 IL26Q9NPH9 171 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 STARD5Q9NSY2 213 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 IRAK4Q9NWZ3 460 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SLC39A1Q9NY26 324 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 SPHK1Q9NYA1 384 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PKD2L2Q9NZM6 624 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 GAGE2DQ9UEU5 116 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 LNPEPQ9UIQ6 1025 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 TP53TG5Q9Y2B4 290 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 CSNK1G3Q9Y6M4 447 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 PKDREJQ9NTG1 2253 aa2.66□□□□□ -1.98
PTCD3-218ENST00000493430 RP1L1Q8IWN7 2480 aaPredicted RBP2.65□□□□□ -1.98
PTCD3-218ENST00000493430 POLEQ07864 2286 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 GLYATL1P3A0A0U1RQE8 302 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 GSAPA4D1B5 854 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CTAGE15A4D2H0 777 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NEMP2A6NFY4 417 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ARGFXA6NJG6 315 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SLC9B1P1A6NJY1 282 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 GOLGA8MH3BSY2 632 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 K7ENP7 123 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ATP6V0E1O15342 81 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 YKT6O15498 198 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PSTPIP1O43586 416 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 DFNA5O60443 496 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 MAGEC1O60732 1142 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NIPSNAP2O75323 286 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 AVILO75366 819 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 POP7O75817 140 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 STK17BO94768 372 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM63AO94886 807 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 IVLP07476 585 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 KRT7P08729 469 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SPARCP09486 303 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CCDC172P0C7W6 258 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 LIPCP11150 499 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 F3P13726 295 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF7P17097 686 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NMBRP28336 390 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CTNNA1P35221 906 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ADRA1AP35348 466 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 DLSTP36957 453 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SPAM1P38567 509 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 HNF4AP41235 474 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 MSH2P43246 934 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NKX2-1P43699 371 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 KPNA2P52292 529 aaKnown RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 LIMK2P53671 638 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TPM4P67936 248 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PRKAA1Q13131 559 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CUL1Q13616 776 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 RFTN1Q14699 578 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PDK2Q15119 407 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ZIC1Q15915 447 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 NADK2Q4G0N4 442 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TEX44Q53QW1 395 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 BOLA3Q53S33 107 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 ZRANB3Q5FWF4 1079 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 C11orf63Q6NUN7 778 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 TTC27Q6P3X3 843 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CORO6Q6QEF8 472 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 MBOAT1Q6ZNC8 495 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 CTAGE6Q86UF2 777 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SERPINA9Q86WD7 417 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PRSS58Q8IYP2 241 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 KATNAL2Q8IYT4 538 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 OR8H2Q8N162 312 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 SFRP1Q8N474 314 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 RAB42Q8N4Z0 105 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 LINC00612Q8N6U2 182 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 PPFIBP2Q8ND30 876 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 OR5AR1Q8NGP9 310 aa2.65□□□□□ -1.99
PTCD3-218ENST00000493430 OR2L2Q8NH16 312 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms