RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 LOXL1Q08397 574 aaPredicted RBP11.72□□□□□ -0.53
USF1-206ENST00000491629 ACSM2AQ08AH3 577 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 C2orf80Q0P641 193 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 ACSM2BQ68CK6 577 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 FAM71E1Q6IPT2 247 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 BANPQ8N9N5 519 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 ZNF524Q96C55 264 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 HS6ST2Q96MM7 605 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 AMDHD1Q96NU7 426 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 KCNA7Q96RP8 456 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 MRPL57Q9BQC6 102 aaKnown RBP11.72□□□□□ -0.53
USF1-206ENST00000491629 ACSS3Q9H6R3 686 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 FANCFQ9NPI8 374 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 GIMAP4Q9NUV9 329 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 SIRT5Q9NXA8 310 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 PAQR5Q9NXK6 330 aaPredicted RBP11.72□□□□□ -0.53
USF1-206ENST00000491629 TAS2R7Q9NYW3 318 aa11.72□□□□□ -0.53
USF1-206ENST00000491629 MEGF8Q7Z7M0 2845 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 A0A087WZY1 265 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 ANXA4P09525 319 aaPredicted RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 LINGO3P0C6S8 592 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 COL6A2P12110 1019 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 IL32P24001 234 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 MANFP55145 182 aaKnown RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 P2RY6Q15077 328 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 SPIN4Q56A73 249 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 FAM110BQ8TC76 370 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 GIMAP5Q96F15 307 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 KLHL15Q96M94 604 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 ZNF382Q96SR6 550 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 KCNK17Q96T54 332 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 RHNO1Q9BSD3 238 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 MRPL46Q9H2W6 279 aaKnown RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 COQ10BQ9H8M1 238 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 BARX1Q9HBU1 254 aaPredicted RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
USF1-206ENST00000491629 NINJ2Q9NZG7 142 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 KLHL13Q9P2N7 655 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 TIMM22Q9Y584 194 aa11.71□□□□□ -0.53
USF1-206ENST00000491629 GOLGA8QA0A0J9YX86 632 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 GOLGA8OA6NCC3 632 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 E7EQL1 145 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 GOLGA8NF8WBI6 632 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 GOLGA8RI6L899 631 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 OIP5O43482 229 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 NDUFB5O43674 189 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ULK1O75385 1050 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 NKX2-2O95096 273 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 KRT6AP02538 564 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 KRT6BP04259 564 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 NGFRP08138 427 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ACP2P11117 423 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ZNF16P17020 682 aaPredicted RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 SFTPDP35247 375 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 KRT6CP48668 564 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 PRIM2P49643 509 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 FOXA1P55317 472 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 CARD18P57730 90 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 CAV1Q03135 178 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ITGADQ13349 1161 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 SLC29A2Q14542 456 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 RASA2Q15283 850 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 CD226Q15762 336 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 TSNAXIP1Q2TAA8 658 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 GLE1Q53GS7 698 aaKnown RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 ZNF678Q5SXM1 525 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 BHLHA15Q7RTS1 189 aaPredicted RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ZNF525Q8N782 197 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 METTL6Q8TCB7 284 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 KISS1RQ969F8 398 aaPredicted RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 ZBTB8AQ96BR9 441 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 SH3YL1Q96HL8 342 aaPredicted RBP11.7□□□□□ -0.54
USF1-206ENST00000491629 CACNG6Q9BXT2 260 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 BEX2Q9BXY8 128 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 POTEKPQ9BYX7 375 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 EQTNQ9NQ60 294 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 PRSS50Q9UI38 385 aa11.7□□□□□ -0.54
USF1-206ENST00000491629 IGHV3-15A0A0B4J1V0 119 aa11.69□□□□□ -0.54
USF1-206ENST00000491629 SLC35F4A4IF30 521 aa11.69□□□□□ -0.54
USF1-206ENST00000491629 DLX3O60479 287 aa11.69□□□□□ -0.54
USF1-206ENST00000491629 LYZL6O75951 148 aa11.69□□□□□ -0.54
USF1-206ENST00000491629 SLITRK5O94991 958 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms