RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NKX6-1P78426 367 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF844Q08AG5 666 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 C17orf67Q0P5P2 114 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 TP53BP2Q13625 1128 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ZNHIT3Q15649 155 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 PDCD2Q16342 344 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 BCL2A1Q16548 175 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 XKR7Q5GH72 579 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 IL23RQ5VWK5 629 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 IKBIPQ70UQ0 350 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 CHMP1BQ7LBR1 199 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 NUFIP2Q7Z417 695 aaKnown RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 SAMD14Q8IZD0 417 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF619Q8N2I2 560 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ZNF614Q8N883 585 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 COX18Q8N8Q8 333 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 FAM76AQ8TAV0 307 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ABHD3Q8WU67 409 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 NEUROG1Q92886 237 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 PERPQ96FX8 193 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 DACH2Q96NX9 599 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 MS4A4EQ96PG1 132 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 ALPK1Q96QP1 1244 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 MED18Q9BUE0 208 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 QRSL1Q9H0R6 528 aaKnown RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 FOXD3Q9UJU5 478 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-211ENST00000491581 CARD8Q9Y2G2 431 aa7.97□□□□□ -1.13
HDAC3-211ENST00000491581 FREM1Q5H8C1 2179 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 IGLV3-32A0A0A0MS00 114 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 A0A1W2PNR3 127 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ALG1L2C9J202 215 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 EMC8O43402 210 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ALOX5P09917 674 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 LINGO3P0C6S8 592 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 G6PDP11413 515 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PTNP21246 168 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 TBXA2RP21731 343 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 SOAT1P35610 550 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 DIO3P55073 304 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 HBA1P69905 142 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PHC1P78364 1004 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 MPP2Q14168 576 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 GANABQ14697 944 aaKnown RBP7.96□□□□□ -1.14
HDAC3-211ENST00000491581 SF3B4Q15427 424 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDAC3-211ENST00000491581 C6orf136Q5SQH8 315 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 OR4F3Q6IEY1 312 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 STAC2Q6ZMT1 411 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ANKRD46Q86W74 232 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
HDAC3-211ENST00000491581 METTL25Q8N6Q8 603 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF781Q8N8C0 355 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 CDRT4Q8N9R6 151 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 FBXO27Q8NI29 283 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PPP1R14CQ8TAE6 165 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 RAB3IL1Q8TBN0 382 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 AENQ8WTP8 325 aaKnown RBP7.96□□□□□ -1.14
HDAC3-211ENST00000491581 MBD6Q96DN6 1003 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ZBED6CLQ96FA7 236 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-211ENST00000491581 LRRC46Q96FV0 321 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PIGMQ9H3S5 423 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PTGES2Q9H7Z7 377 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 SLC24A3Q9HC58 644 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 SDHAF3Q9NRP4 125 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 GPATCH2Q9NW75 528 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 NTMQ9P121 344 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 ATP6V1HQ9UI12 483 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 PROCRQ9UNN8 238 aa7.96□□□□□ -1.14
HDAC3-211ENST00000491581 DSCAMO60469 2012 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 CLDN24A6NM45 220 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 H7C1Q1 480 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 CASKO14936 926 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 KLF4O43474 513 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 TYROBPO43914 113 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 NPHS1O60500 1241 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 FCMRO60667 390 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 TBX19O60806 448 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 LY6G6DO95868 133 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 BPGMP07738 259 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 FGF4P08620 206 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 DDX5P17844 614 aaKnown RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 ENPP1P22413 925 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 CRYGSP22914 178 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 AGTR1P30556 359 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 ETV4P43268 484 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 GSTM5P46439 218 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 CCT3P49368 545 aaKnown RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 NME5P56597 212 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 POU6F2P78424 691 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 PLAURQ03405 335 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 LTBQ06643 244 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 MAPK14Q16539 360 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 PGS1Q32NB8 556 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 Q5PR19 223 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 DCST2Q5T1A1 773 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 HBMQ6B0K9 141 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms