RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TRNT1Q96Q11 434 aaKnown RBP14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PRDM14Q9GZV8 571 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SAP130Q9H0E3 1048 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLC25A37Q9NYZ2 338 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 P2RX2Q9UBL9 471 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NDUFAF1Q9Y375 327 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF407Q9C0G0 2248 aa14.77□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RP1L1Q8IWN7 2480 aaPredicted RBP14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GTPBP1O00178 669 aaKnown RBP14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ANGPT2O15123 496 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 HCRTR2O43614 444 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 UGT2B17O75795 530 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CHRM4P08173 479 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NR2F1P10589 423 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CHMP24386 653 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DSTNP60981 165 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF117Q03924 483 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RAET1LQ5VY80 246 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TMEM211Q6ICI0 200 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ENPP6Q6UWR7 440 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RPTNQ6XPR3 784 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MSRB3Q8IXL7 192 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ULK2Q8IYT8 1036 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 OIT3Q8WWZ8 545 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 THUMPD1Q9NXG2 353 aaKnown RBP14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ALKBH4Q9NXW9 302 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLAMF8Q9P0V8 285 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 KCNE5Q9UJ90 142 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CAMK2AQ9UQM7 478 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 BAHCC1Q9P281 2608 aa14.76□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GTF3C1Q12789 2109 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 HIVEP3Q5T1R4 2406 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 A0A087WZY1 265 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TRBV5-3A0A0A0MS03 114 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CENPVL1A0A0U1RR11 272 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SERINC4A6NH21 518 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FAM47E-STBD1D6RA91 191 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SNRPB2P08579 225 aaKnown RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 HOXD4P09016 255 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 UBL4AP11441 157 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PPIBP23284 216 aaKnown RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LSP1P33241 339 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PTGER4P35408 488 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF41P51814 821 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SMSP52788 366 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GYS2P54840 703 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SUMO3P55854 103 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 B3GALT5-AS1P59052 145 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CHRNEQ04844 493 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FADDQ13158 208 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RGNQ15493 299 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 GLYR1Q49A26 553 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 C1orf185Q5T7R7 199 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 AP1ARQ63HQ0 302 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ARSKQ6UWY0 536 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LRRC74BQ6ZQY2 392 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RPRMLQ8N4K4 120 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MARVELD2Q8N4S9 558 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ITLN2Q8WWU7 325 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 WDYHV1Q96HA8 205 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PIGQQ9BRB3 760 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NSRP1Q9H0G5 558 aaKnown RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SLC38A1Q9H2H9 487 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SAR1AQ9NR31 198 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 VAPAQ9P0L0 249 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 VDAC3Q9Y277 283 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CARD8Q9Y2G2 431 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 L3MBTL1Q9Y468 752 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FAM215AQ9Y5M1 114 aa14.75□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TMEM247A6NEH6 219 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 AHRRA9YTQ3 701 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF264O43296 627 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 OIP5O43482 229 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 EIF4E2O60573 245 aaKnown RBP14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 BCHEP06276 602 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ADH7P40394 386 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 LHX2P50458 406 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 P2RX1P51575 399 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SEC24CP53992 1094 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 KLF10Q13118 480 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 FGFBP1Q14512 234 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MAPK14Q16539 360 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 NDUFAF6Q330K2 333 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RTL6Q6ICC9 239 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CBLN3Q6UW01 205 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DLEU7Q6UYE1 221 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 B3GNT6Q6ZMB0 384 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 SPATA21Q7Z572 469 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MRGPRGQ86SM5 289 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DHDDSQ86SQ9 333 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RETREG3Q86VR2 466 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 ZNF808Q8N4W9 903 aaPredicted RBP14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 DPP10Q8N608 796 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 TMCO5AQ8N6Q1 288 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 PSMG3-AS1Q96PY0 264 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 RUBCNLQ9H714 662 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 MED17Q9NVC6 651 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CALML5Q9NZT1 146 aa14.74□□□□□ -0.05
MSH5-SAPCD1-206ENST00000491552 CORO2BQ9UQ03 480 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms