RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TLCD1Q96CP7 247 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 COQ8BQ96D53 544 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 PAIP2Q9BPZ3 127 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 GLRX2Q9NS18 164 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 EXD2Q9NVH0 621 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 GALNT8Q9NY28 637 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 PROCRQ9UNN8 238 aa14.95□□□□□ -0.02
PDLIM2-217ENST00000491330 CRYBG3Q68DQ2 2970 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 SH3D21A4FU49 640 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 KDM4EB2RXH2 506 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 FREM3P0C091 2139 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 ACP2P11117 423 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 LAMP1P11279 417 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 ARRB2P32121 409 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 PCYT1AP49585 367 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 CLDN8P56748 225 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 B3GALT5-AS1P59052 145 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 RAC1P63000 192 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 PTGR1Q14914 329 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 DPY19L1Q2PZI1 675 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 ATAD3BQ5T9A4 648 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 ANXA8L1Q5VT79 327 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 CDC20BQ86Y33 519 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 PSMA8Q8TAA3 256 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 FAM110BQ8TC76 370 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 FOXC2Q99958 501 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 DPY30Q9C005 99 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 ST6GALNAC2Q9UJ37 374 aa14.94□□□□□ -0.02
PDLIM2-217ENST00000491330 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 NBPF19A0A087WUL8 3843 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 TRPC5OSA6NMA1 111 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 KLF11O14901 512 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 TGM6O95932 706 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 POU2F1P14859 743 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 EFNA1P20827 205 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 CD79BP40259 229 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 MAP3K8P41279 467 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 ANXA11P50995 505 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 CLNS1AP54105 237 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 SIRPAP78324 504 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 PDCD2Q16342 344 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 ESPNLQ6ZVH7 1005 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 GTPBP8Q8N3Z3 284 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 METTL25Q8N6Q8 603 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 ZNF614Q8N883 585 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 ZNF781Q8N8C0 355 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 GATSQ8NAP1 163 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 CDS1Q92903 461 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 GIMAP5Q96F15 307 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 C16orf58Q96GQ5 468 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 SH3YL1Q96HL8 342 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 MED18Q9BUE0 208 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 VIPAS39Q9H9C1 493 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 FLRT3Q9NZU0 649 aa14.93□□□□□ -0.02
PDLIM2-217ENST00000491330 INTS1Q8N201 2190 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 C7orf72A4D263 438 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 C16orf97H3BN30 126 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 C6orf47O95873 294 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 IGKV1D-16P01601 117 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 RAF1P04049 648 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 CD8BP10966 210 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 G6PDP11413 515 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 IST1P53990 364 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 ATP12AP54707 1039 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 SUMO3P55854 103 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 MAGOHP61326 146 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 MPP2Q14168 576 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 DCST2Q5T1A1 773 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 OGFOD2Q6N063 350 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 FAM214BQ7L5A3 538 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 C16orf62Q7Z3J2 963 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 GALNT10Q86SR1 603 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 TRIML2Q8N7C3 387 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 TOR1AIP2Q8NFQ8 470 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 OR5M1Q8NGP8 315 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 FNDC9Q8TBE3 224 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 C3orf30Q96M34 536 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 SORT1Q99523 831 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 RNF122Q9H9V4 155 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 MEAF6Q9HAF1 191 aa14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 CCM2LQ9NUG4 571 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 GPC6Q9Y625 555 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-217ENST00000491330 NUP214P35658 2090 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 FAM221AA4D161 298 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 ITM2AO43736 263 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 SNNO75324 88 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 PPP3CBP16298 524 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 LBPP18428 481 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 BGNP21810 368 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 MATN1P21941 496 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 ELK4P28324 431 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 ADH6P28332 368 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 P2RX1P51575 399 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 CLDN20P56880 219 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 RIPPLY3P57055 190 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 CARD18P57730 90 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 HPCAP84074 193 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 LRRC74AQ0VAA2 488 aa14.91□□□□□ -0.02
PDLIM2-217ENST00000491330 BST1Q10588 318 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms