RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	KLHL15	Q96M94	604 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	AMDHD1	Q96NU7	426 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	NPAS1	Q99742	590 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	FUT8	Q9BYC5	575 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	TMEM185B	Q9H7F4	350 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	GP6	Q9HCN6	339 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	NINJ2	Q9NZG7	142 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	KLHL13	Q9P2N7	655 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	GDF2	Q9UK05	429 aa	Predicted RBP	13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839	STK38L	Q9Y2H1	464 aa		13.57	□□□□□ -0.24
AGAP3-222	ENST00000490839		A0A096LNT2	108 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	CCDC151	A5D8V7	595 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	DLX3	O60479	287 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	OXSR1	O95747	527 aa	Predicted RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	CD8A	P01732	235 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	ENO1	P06733	434 aa	Known RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	TAC1	P20366	129 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	CARD18	P57730	90 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	SLC18A2	Q05940	514 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	BTK	Q06187	659 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	SLC29A2	Q14542	456 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	UNC50	Q53HI1	259 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	ZNF678	Q5SXM1	525 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	FAM71E1	Q6IPT2	247 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	NUFIP2	Q7Z417	695 aa	Known RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	ATG4D	Q86TL0	474 aa	Predicted RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	TRABD2A	Q86V40	505 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	TDRP	Q86YL5	185 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	MMGT1	Q8N4V1	131 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	CEP112	Q8N8E3	955 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	PIK3R3	Q92569	461 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	HOXB13	Q92826	284 aa	Predicted RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	CPNE4	Q96A23	557 aa	Predicted RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	PAFAH2	Q99487	392 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	RHNO1	Q9BSD3	238 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	MYNN	Q9NPC7	610 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	TIGAR	Q9NQ88	270 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	TMEM160	Q9NX00	188 aa		13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	WBP11	Q9Y2W2	641 aa	Known RBP	13.56	□□□□□ -0.24
AGAP3-222	ENST00000490839	IGHV4-30-2	A0A087WSY4	118 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ESYT3	A0FGR9	886 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	SERTM1	A2A2V5	107 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	DPRX	A6NFQ7	191 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ELK4	P28324	431 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	LCP2	Q13094	533 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ITGAD	Q13349	1161 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	TMEM249	Q2WGJ8	235 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	VPS26B	Q4G0F5	336 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	GLE1	Q53GS7	698 aa	Known RBP	13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	UBAP2	Q5T6F2	1119 aa	Known RBP	13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	IKBIP	Q70UQ0	350 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	MISP	Q8IVT2	679 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	GATS	Q8NAP1	163 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	OR4C3	Q8NH37	302 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	POC1B	Q8TC44	478 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	GPR151	Q8TDV0	419 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ROBO4	Q8WZ75	1007 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	TMEM237	Q96Q45	408 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	AMBRA1	Q9C0C7	1298 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	EQTN	Q9NQ60	294 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	ZDHHC18	Q9NUE0	388 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	CISD1	Q9NZ45	108 aa	Known RBP	13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	LPAR3	Q9UBY5	353 aa		13.55	□□□□□ -0.24
AGAP3-222	ENST00000490839	TRIM49D1	C9J1S8	452 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	SSX4	O60224	188 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	GPRIN2	O60269	458 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	NKX2-2	O95096	273 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	ADA	P00813	363 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	PRPS2	P11908	318 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	LCN1	P31025	176 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	MAP3K8	P41279	467 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	EIF1	P41567	113 aa	Known RBP	13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	NUDT6	P53370	316 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	CDH11	P55287	796 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	PKNOX1	P55347	436 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	DSCR9	P59020	149 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	VLDLR	P98155	873 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	KRTAP24-1	Q3LI83	254 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	SPDYA	Q5MJ70	313 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	TEX35	Q5T0J7	233 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	CLEC2A	Q6UVW9	174 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	SSX8	Q7RTT4	187 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	RELL1	Q8IUW5	271 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	TUSC5	Q8IXB3	177 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	LILRA2	Q8N149	483 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	FAM76A	Q8TAV0	307 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	ADAD1	Q96M93	576 aa	Known RBP	13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	TNFRSF13C	Q96RJ3	184 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	SRXN1	Q9BYN0	137 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	ZNF180	Q9UJW8	692 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	TIMM22	Q9Y584	194 aa		13.54	□□□□□ -0.24
AGAP3-222	ENST00000490839	YLPM1	P49750	1951 aa	Known RBP	13.53	□□□□□ -0.24
AGAP3-222	ENST00000490839	SHISA9	B4DS77	424 aa		13.53	□□□□□ -0.24
AGAP3-222	ENST00000490839	NTN1	O95631	604 aa		13.53	□□□□□ -0.24
AGAP3-222	ENST00000490839	LINGO3	P0C6S8	592 aa		13.53	□□□□□ -0.24
AGAP3-222	ENST00000490839	PYGB	P11216	843 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms