RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GRID1Q9ULK0 1009 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 VDAC3Q9Y277 283 aa7.28□□□□□ -1.24
USP39-216ENST00000490193 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.24
USP39-216ENST00000490193 GNG14A0A1W2PPG7 69 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 A0A1W2PRB8 838 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 SHISA9B4DS77 424 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 UPK1AO00322 258 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 MANBAO00462 879 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 TNFSF11O14788 317 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 RAD51CO43502 376 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 SSX4O60224 188 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 OR4F21O95013 312 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 KRT6AP02538 564 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 KRT6BP04259 564 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 COL6A2P12110 1019 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 SLC25A16P16260 332 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 DDCP20711 480 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 IL32P24001 234 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 TIA1P31483 386 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP39-216ENST00000490193 MAP3K8P41279 467 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 KRT6CP48668 564 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 NUDT6P53370 316 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 CASP9P55211 416 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 CDH13P55290 713 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 ITGADQ13349 1161 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 ZNHIT3Q15649 155 aaPredicted RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 TSNAXIP1Q2TAA8 658 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 PLPPR5Q32ZL2 321 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 GRAMD1BQ3KR37 738 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 TMEM201Q5SNT2 666 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 CPTPQ5TA50 214 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 HBMQ6B0K9 141 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 C11orf71Q6IPW1 123 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 CLEC2AQ6UVW9 174 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 ZDHHC24Q6UX98 284 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 RPS27LQ71UM5 84 aaKnown RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 TRABD2AQ86V40 505 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 BANPQ8N9N5 519 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP39-216ENST00000490193 FBXO25Q8TCJ0 367 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 OSTF1Q92882 214 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 KISS1RQ969F8 398 aaPredicted RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 CPNE4Q96A23 557 aaPredicted RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 ADAD1Q96M93 576 aaKnown RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 KLHL15Q96M94 604 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 RNF145Q96MT1 663 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 BBS4Q96RK4 519 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 NPAS1Q99742 590 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 BEX2Q9BXY8 128 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 ACPTQ9BZG2 426 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 VPS11Q9H270 941 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 C12orf49Q9H741 205 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 C3orf14Q9HBI5 128 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 MED17Q9NVC6 651 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 CISD1Q9NZ45 108 aaKnown RBP7.27□□□□□ -1.25
USP39-216ENST00000490193 KLHL13Q9P2N7 655 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 B3GALT5Q9Y2C3 310 aa7.27□□□□□ -1.25
USP39-216ENST00000490193 ALPK2Q86TB3 2170 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 SERTM1A2A2V5 107 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 FAM234BA2RU67 622 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 A8MT66 165 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 NDUFB5O43674 189 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 RAMP1O60894 148 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 KCNH1O95259 989 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 OXSR1O95747 527 aaPredicted RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 IGKV1D-16P01601 117 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 JUNP05412 331 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 SBK3P0C264 359 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 CHN1P15882 459 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ME2P23368 584 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ELK4P28324 431 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 HSD17B3P37058 310 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 NCBP2P52298 156 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP39-216ENST00000490193 PLTPP55058 493 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 MANFP55145 182 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 CARD18P57730 90 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 IRX1P78414 480 aaPredicted RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 MRPS25P82663 173 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 ACSM2AQ08AH3 577 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ZNF763Q0D2J5 394 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 SLC29A2Q14542 456 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 RASA2Q15283 850 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 TSC22D1Q15714 1073 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 PRSS53Q2L4Q9 553 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 TCHHL1Q5QJ38 904 aaPredicted RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 AGAP6Q5VW22 663 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ACSM2BQ68CK6 577 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ALKBH2Q6NS38 261 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 TMEM107Q6UX40 140 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 Q6ZT83 130 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 NUFIP2Q7Z417 695 aaKnown RBP7.26□□□□□ -1.25
USP39-216ENST00000490193 CCDC25Q86WR0 208 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 MISPQ8IVT2 679 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 CDYL2Q8N8U2 506 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 OR4C3Q8NH37 302 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 POC1BQ8TC44 478 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ABHD3Q8WU67 409 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 ELP4Q96EB1 424 aa7.26□□□□□ -1.25
USP39-216ENST00000490193 APIPQ96GX9 242 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms