RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 POTEKPQ9BYX7 375 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 MRPL46Q9H2W6 279 aaKnown RBP12.4□□□□□ -0.42
VARS-227ENST00000489979 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SUPT7LO94864 414 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 OXSR1O95747 527 aaPredicted RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 COL6A2P12110 1019 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 ME2P23368 584 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SHC1P29353 583 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 NTSP30990 170 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SFTPDP35247 375 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 GSTM5P46439 218 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 ZNF41P51814 821 aaPredicted RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 CDH11P55287 796 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 SLC18A2Q05940 514 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 ZNF239Q16600 458 aaKnown RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 NRF1Q16656 503 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 UNC50Q53HI1 259 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 GALNT18Q6P9A2 607 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 GPRIN3Q6ZVF9 776 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 BHLHA15Q7RTS1 189 aaPredicted RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 TRABD2AQ86V40 505 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 TMEM151AQ8N4L1 468 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SH3YL1Q96HL8 342 aaPredicted RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 REXO5Q96IC2 774 aaKnown RBP12.39□□□□□ -0.43
VARS-227ENST00000489979 AMDHD1Q96NU7 426 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 ZNF382Q96SR6 550 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 C19orf24Q9BVV8 132 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SRXN1Q9BYN0 137 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 EQTNQ9NQ60 294 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 TMEM160Q9NX00 188 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 KLHL13Q9P2N7 655 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 GRID1Q9ULK0 1009 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 MALRD1Q5VYJ5 2156 aa12.39□□□□□ -0.43
VARS-227ENST00000489979 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 PHBP35232 272 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 CASP9P55211 416 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 IRX1P78414 480 aaPredicted RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 VLDLRP98155 873 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 ZNF763Q0D2J5 394 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 ITGADQ13349 1161 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 SLC29A2Q14542 456 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 P2RY6Q15077 328 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 STK11Q15831 433 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 GLE1Q53GS7 698 aaKnown RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 ZNF678Q5SXM1 525 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 TEX35Q5T0J7 233 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 FAM71E1Q6IPT2 247 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 LILRA2Q8N149 483 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 GPR151Q8TDV0 419 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 ACTRT2Q8TDY3 377 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 CPNE4Q96A23 557 aaPredicted RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 USB1Q9BQ65 265 aaKnown RBP12.38□□□□□ -0.43
VARS-227ENST00000489979 CACNG6Q9BXT2 260 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 HHATLQ9HCP6 504 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 MIEF1Q9NQG6 463 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 TAS2R7Q9NYW3 318 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 LPAR3Q9UBY5 353 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 TIMM22Q9Y584 194 aa12.38□□□□□ -0.43
VARS-227ENST00000489979 TTC36A6NLP5 189 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 ZNF814B7Z6K7 855 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 DLX3O60479 287 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 YES1P07947 543 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 INHBAP08476 426 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 MANFP55145 182 aaKnown RBP12.37□□□□□ -0.43
VARS-227ENST00000489979 DSCR9P59020 149 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 PPA1Q15181 289 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 SPDYAQ5MJ70 313 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 CYB5R2Q6BCY4 276 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 FCRLAQ7L513 359 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 ZAR1Q86SH2 424 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 TDRPQ86YL5 185 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 MMGT1Q8N4V1 131 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 KCNA7Q96RP8 456 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 TIGARQ9NQ88 270 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 SIRT5Q9NXA8 310 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 NINJ2Q9NZG7 142 aa12.37□□□□□ -0.43
VARS-227ENST00000489979 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
VARS-227ENST00000489979 ABCD4O14678 606 aa12.36□□□□□ -0.43
VARS-227ENST00000489979 LYZL6O75951 148 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms