RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 KRT20P35900 424 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 RFX3P48380 749 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 DGKQP52824 942 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 ART1P52961 327 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 WDR4P57081 412 aaKnown RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 RPS26P62854 115 aaKnown RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 FOXF1Q12946 379 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 TOMM34Q15785 309 aaPredicted RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 KLHL26Q53HC5 615 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 IL23RQ5VWK5 629 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 AP1ARQ63HQ0 302 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 ZCCHC12Q6PEW1 402 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 CXorf67Q86X51 503 aaPredicted RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 GRAMD2AQ8IUY3 354 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 CLEC4FQ8N1N0 589 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 FAM71CQ8NEG0 241 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 OR5D16Q8NGK9 328 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 ZFP28Q8NHY6 868 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 SFXN5Q8TD22 340 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 ZBTB9Q96C00 473 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 MBD6Q96DN6 1003 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 TEX37Q96LM6 180 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 PPP3R2Q96LZ3 170 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 HS3ST6Q96QI5 342 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 RBM24Q9BX46 236 aaKnown RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 PINK1Q9BXM7 581 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 POLDIP3Q9BY77 421 aaKnown RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 OPN3Q9H1Y3 402 aaPredicted RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 PIGUQ9H490 435 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 CCM2LQ9NUG4 571 aaPredicted RBP10.6□□□□□ -0.71
SRSF4-204ENST00000489898 SH3BP4Q9P0V3 963 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 VDAC3Q9Y277 283 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
SRSF4-204ENST00000489898 UQCRHLA0A096LP55 91 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 A0A0J9YW62 118 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 SH3D21A4FU49 640 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 ADAMDEC1O15204 470 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 SEC14L5O43304 696 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 GMFGO60234 142 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 SS18L1O75177 396 aaPredicted RBP10.59□□□□□ -0.71
SRSF4-204ENST00000489898 KCNH1O95259 989 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 SERPINE1P05121 402 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 CRHP06850 196 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 EDNRAP25101 427 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 LCN1P31025 176 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 GPC1P35052 558 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 HPCAL1P37235 193 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 PEX19P40855 299 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 MANFP55145 182 aaKnown RBP10.59□□□□□ -0.71
SRSF4-204ENST00000489898 FAM27E3Q08E93 113 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 C17orf67Q0P5P2 114 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 PON3Q15166 354 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
SRSF4-204ENST00000489898 DCST2Q5T1A1 773 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 LRIG3Q6UXM1 1119 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 MAVSQ7Z434 540 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 OR5AK3PQ8NH89 298 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 ACTRT2Q8TDY3 377 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 OR5P2Q8WZ92 322 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 RNF145Q96MT1 663 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 BTBD2Q9BX70 525 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 SRXN1Q9BYN0 137 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 BHLHE41Q9C0J9 482 aaPredicted RBP10.59□□□□□ -0.71
SRSF4-204ENST00000489898 PIGMQ9H3S5 423 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 AKTIPQ9H8T0 292 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 AP4B1Q9Y6B7 739 aa10.59□□□□□ -0.71
SRSF4-204ENST00000489898 TUBAL3A6NHL2 446 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SDHDO14521 159 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SNNO75324 88 aaPredicted RBP10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CD8BP10966 210 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CD53P19397 219 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 IL12AP29459 219 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 PRKAG1P54619 331 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CLDN8P56748 225 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 EMX2Q04743 252 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SKP2Q13309 424 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 POU4F3Q15319 338 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 ZNHIT3Q15649 155 aaPredicted RBP10.58□□□□□ -0.72
SRSF4-204ENST00000489898 MAPK11Q15759 364 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CHI3L2Q15782 390 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 MAPK14Q16539 360 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SMU1Q2TAY7 513 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 OR4F3Q6IEY1 312 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 HEPHL1Q6MZM0 1159 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 R3HCC1LQ7Z5L2 792 aaKnown RBP10.58□□□□□ -0.72
SRSF4-204ENST00000489898 COX18Q8N8Q8 333 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 FNDC5Q8NAU1 212 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CHDHQ8NE62 594 aaPredicted RBP10.58□□□□□ -0.72
SRSF4-204ENST00000489898 OR8J2Q8NGG1 315 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 OR10D3Q8NH80 312 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 CEP70Q8NHQ1 597 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 MIPOL1Q8TD10 442 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 RNF128Q8TEB7 428 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SMPDL3BQ92485 455 aa10.58□□□□□ -0.72
SRSF4-204ENST00000489898 SH3YL1Q96HL8 342 aaPredicted RBP10.58□□□□□ -0.72
SRSF4-204ENST00000489898 ALPK1Q96QP1 1244 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms