RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CRYBA2P53672 197 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 BLOC1S1P78537 153 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SRSF11Q05519 484 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 RING1Q06587 406 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ACSM1Q08AH1 577 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB40BQ12829 278 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC14A1Q13336 389 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 GTF2H2Q13888 395 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SSPNQ14714 243 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM132DQ14C87 1099 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 TOMM20Q15388 145 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 MPPED2Q15777 294 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 FNDC3BQ53EP0 1204 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF770Q6IQ21 691 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 H3F3CQ6NXT2 135 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 GTF2H2CQ6P1K8 395 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 LINGO4Q6UY18 593 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF621Q6ZSS3 439 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 DPPA2Q7Z7J5 298 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ANKRD46Q86W74 232 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 THEM5Q8N1Q8 247 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 AQP11Q8NBQ7 271 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 OR11G2Q8NGC1 345 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 OR6X1Q8NH79 312 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 HAVCR2Q8TDQ0 301 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 SMAP2Q8WU79 429 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 ESAMQ96AP7 390 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 LRR1Q96L50 414 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 HBEGFQ99075 208 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 FDXACB1Q9BRP7 624 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 UTP23Q9BRU9 249 aaKnown RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 MFFQ9GZY8 342 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 CDT1Q9H211 546 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRN3Q9H3W5 708 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 KLHL31Q9H511 634 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 IPPKQ9H8X2 491 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 NMNAT1Q9HAN9 279 aaPredicted RBP4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 BEX1Q9HBH7 125 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 GFOD1Q9NXC2 390 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 NKIRAS2Q9NYR9 191 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 OR12D3Q9UGF7 316 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 POLLQ9UGP5 575 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 CA14Q9ULX7 337 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 CAMK2AQ9UQM7 478 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 TP53TG5Q9Y2B4 290 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 KCTD3Q9Y597 815 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 WDR81Q562E7 1941 aa4.46□□□□□ -1.7
SNRNP40-206ENST00000489853 DNAJC25-GNG10A0A024R161 153 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 FXYD6-FXYD2A0A087WZ82 144 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 METTL21EPA6NDL7 271 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 OR51F1A6NGY5 319 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MAGEB17A8MXT2 336 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MANBAO00462 879 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 B4GALT5O43286 388 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 PPIHO43447 177 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CHST10O43529 356 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 LDB2O43679 373 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 BRINP1O60477 761 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MAFKO60675 156 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 EFCAB14O75071 495 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RDH16O75452 317 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RPP40O75818 363 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 LATS1O95835 1130 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 IFNA2P01563 188 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 WNT1P04628 370 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 HLA-DQB2P05538 268 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CELA2BP08218 269 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CD3GP09693 182 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 SBK2P0C263 348 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ATXN1LP0C7T5 689 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 GKN3PP0CG01 181 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ACP2P11117 423 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 HLA-DPA1P20036 260 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 DRD5P21918 477 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 UQCRC2P22695 453 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 XPAP23025 273 aaPredicted RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CERS1P27544 350 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ADH6P28332 368 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 ADORA2BP29275 332 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 NOS3P29474 1203 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 AGTR1P30556 359 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 GKP32189 559 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RPL3P39023 403 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CAP2P40123 477 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MNDAP41218 407 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 STAT5AP42229 794 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 RAD52P43351 418 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 KIR3DL1P43629 444 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 XCR1P46094 333 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 NPBWR1P48145 328 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 MECP2P51608 486 aaKnown RBP4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 CCR9P51686 369 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 STC1P52823 247 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 GAS1P54826 345 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 IL2P60568 153 aa4.45□□□□□ -1.7
SNRNP40-206ENST00000489853 PKIAP61925 76 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms