RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 UROSP10746 265 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 IL32P24001 234 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 LCN1P31025 176 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 EIF1P41567 113 aaKnown RBP17.41■□□□□ 0.38
APTX-229ENST00000489583 CCT5P48643 541 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 RPS4XP62701 263 aaKnown RBP17.41■□□□□ 0.38
APTX-229ENST00000489583 GUSBP1Q15486 140 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 KRT71Q3SY84 523 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 LRIG3Q6UXM1 1119 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 ZNF551Q7Z340 670 aaPredicted RBP17.41■□□□□ 0.38
APTX-229ENST00000489583 GATSQ8NAP1 163 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 ZNF527Q8NB42 609 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 PPP1R14CQ8TAE6 165 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 SH3YL1Q96HL8 342 aaPredicted RBP17.41■□□□□ 0.38
APTX-229ENST00000489583 MARK4Q96L34 752 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 MS4A4EQ96PG1 132 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 RTN4RQ9BZR6 473 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 ESRP2Q9H6T0 727 aaKnown RBP17.41■□□□□ 0.38
APTX-229ENST00000489583 UBQLN4Q9NRR5 601 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 HIVEP2P31629 2446 aa17.41■□□□□ 0.38
APTX-229ENST00000489583 H3BNH8 94 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 KLF4O43474 513 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 OXSR1O95747 527 aaPredicted RBP17.4■□□□□ 0.38
APTX-229ENST00000489583 OPN1LWP04000 364 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 NGFRP08138 427 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 ATP6V1C1P21283 382 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 SLC6A8P48029 635 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 SLC18A2Q05940 514 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 VEZF1Q14119 521 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 CAPRIN1Q14444 709 aaKnown RBP17.4■□□□□ 0.38
APTX-229ENST00000489583 RNPS1Q15287 305 aaKnown RBP17.4■□□□□ 0.38
APTX-229ENST00000489583 ETFDHQ16134 617 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 CCDC153Q494R4 210 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 ZYG11AQ6WRX3 759 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 GALNT10Q86SR1 603 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 COX18Q8N8Q8 333 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 AKAP1Q92667 903 aaKnown RBP eCLIP17.4■□□□□ 0.38
APTX-229ENST00000489583 OSTF1Q92882 214 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 RNF145Q96MT1 663 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 USB1Q9BQ65 265 aaKnown RBP17.4■□□□□ 0.38
APTX-229ENST00000489583 TMEM185BQ9H7F4 350 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 C1orf109Q9NX04 203 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 LGALS13Q9UHV8 139 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 LAMP3Q9UQV4 416 aa17.4■□□□□ 0.38
APTX-229ENST00000489583 DSCAMO60469 2012 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 A0A1W2PRB8 838 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 C7orf72A4D263 438 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 ADAMDEC1O15204 470 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 CLOCKO15516 846 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 NKX2-2O95096 273 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 THBDP07204 575 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 PAX1P15863 534 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 PSMB1P20618 241 aaKnown RBP17.39■□□□□ 0.37
APTX-229ENST00000489583 PRIM2P49643 509 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 FOXA1P55317 472 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 ZNF844Q08AG5 666 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 TMEM44Q2T9K0 475 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.37
APTX-229ENST00000489583 CEP85LQ5SZL2 805 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 FIGNL1Q6PIW4 674 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 FRMD7Q6ZUT3 714 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 TRABD2AQ86V40 505 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 PRIMA1Q86XR5 153 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 LILRA2Q8N149 483 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 B4GALNT2Q8NHY0 566 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.39■□□□□ 0.37
APTX-229ENST00000489583 FBXW5Q969U6 566 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 CPNE4Q96A23 557 aaPredicted RBP17.39■□□□□ 0.37
APTX-229ENST00000489583 KLHL15Q96M94 604 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 REEP4Q9H6H4 257 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 LRTM1Q9HBL6 345 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 ZNF701Q9NV72 531 aaPredicted RBP17.39■□□□□ 0.37
APTX-229ENST00000489583 MED17Q9NVC6 651 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 RNF115Q9Y4L5 304 aa17.39■□□□□ 0.37
APTX-229ENST00000489583 KIAA1324LA8MWY0 1029 aaPredicted RBP17.38■□□□□ 0.37
APTX-229ENST00000489583 RGS16O15492 202 aaPredicted RBP17.38■□□□□ 0.37
APTX-229ENST00000489583 AKAP10O43572 662 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 CD3EP07766 207 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 NEFHP12036 1026 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 H2AFXP16104 143 aaPredicted RBP17.38■□□□□ 0.37
APTX-229ENST00000489583 SFTPDP35247 375 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 IDUAP35475 653 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 CASP8Q14790 479 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.38■□□□□ 0.37
APTX-229ENST00000489583 PRSS53Q2L4Q9 553 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 PLPPR5Q32ZL2 321 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 APOOLQ6UXV4 268 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 R3HCC1LQ7Z5L2 792 aaKnown RBP17.38■□□□□ 0.37
APTX-229ENST00000489583 OR4C3Q8NH37 302 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 FBXO30Q8TB52 745 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 MZB1Q8WU39 189 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 HSD17B8Q92506 261 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 CCT7Q99832 543 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 ALG2Q9H553 416 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 MID2Q9UJV3 735 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 JMJD1CQ15652 2540 aa17.38■□□□□ 0.37
APTX-229ENST00000489583 UBFD1O14562 309 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms