RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 A0A1W2PRB8 838 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 GJE1A6NN92 205 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 UBFD1O14562 309 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 CLOCKO15516 846 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 GLRA3O75311 464 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 OPN1LWP04000 364 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 UROSP10746 265 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 IL32P24001 234 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 AGTR1P30556 359 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 EIF1P41567 113 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 SERPINB4P48594 390 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 CARD18P57730 90 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 DMTNQ08495 405 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 RNPS1Q15287 305 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 ETFDHQ16134 617 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 ZNF239Q16600 458 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 CLEC12BQ2HXU8 276 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 CPTPQ5TA50 214 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 ZYG11AQ6WRX3 759 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 FRMD7Q6ZUT3 714 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 TRMT10CQ7L0Y3 403 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 TRABD2AQ86V40 505 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 COX18Q8N8Q8 333 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 OR4C3Q8NH37 302 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 FBXO30Q8TB52 745 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 JADE3Q92613 823 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 HOXB13Q92826 284 aaPredicted RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 FBXW5Q969U6 566 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 GTPBP3Q969Y2 492 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 CIDECQ96AQ7 238 aaPredicted RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 PPCDCQ96CD2 204 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 ZNF764Q96H86 408 aaPredicted RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 SH3YL1Q96HL8 342 aaPredicted RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 KLHL15Q96M94 604 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 TMEM204Q9BSN7 226 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 HDHD5Q9BXW7 423 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 C12orf65Q9H3J6 166 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 ESRP2Q9H6T0 727 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 LRTM1Q9HBL6 345 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 UBQLN4Q9NRR5 601 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 MED17Q9NVC6 651 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 HIVEP2P31629 2446 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 PRR14LQ5THK1 2151 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
SNX17-207ENST00000489402 CHD3Q12873 2000 aaKnown RBP8.36□□□□□ -1.07
SNX17-207ENST00000489402 A0A0J9YW62 118 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 A0A1W2PP18 115 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 A0A1W2PQD3 144 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 G3V2L1 256 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 SLC28A1O00337 649 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 RIPK2O43353 540 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 RGS14O43566 566 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 AKAP10O43572 662 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CRLF1O75462 422 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 KCNK2O95069 426 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 HSPA4LO95757 839 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 NUDT14O95848 222 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 TP53P04637 393 aaPredicted RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 FESP07332 822 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CD3EP07766 207 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ALOX5P09917 674 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ACP2P11117 423 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 NEFHP12036 1026 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 NID1P14543 1247 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 DDX5P17844 614 aaKnown RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 PSMA4P25789 261 aaKnown RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 ELK4P28324 431 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 SFTPDP35247 375 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 IDUAP35475 653 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 MAP3K8P41279 467 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 PRIM2P49643 509 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 POU6F2P78424 691 aaPredicted RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 TNK1Q13470 666 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CAPRIN1Q14444 709 aaKnown RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 CCDC153Q494R4 210 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ANKRD26P1Q6NSI1 321 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ADAM5Q6NVV9 412 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 FIGNL1Q6PIW4 674 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 LILRA2Q8N149 483 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 SLC16A11Q8NCK7 471 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 B4GALNT2Q8NHY0 566 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 RNF128Q8TEB7 428 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ROBO4Q8WZ75 1007 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 OSTF1Q92882 214 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CPNE4Q96A23 557 aaPredicted RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 S100PBPQ96BU1 408 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CHMP6Q96FZ7 201 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 EGLN2Q96KS0 407 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 CCT7Q99832 543 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 REEP4Q9H6H4 257 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 ACSS1Q9NUB1 689 aaPredicted RBP8.35□□□□□ -1.07
SNX17-207ENST00000489402 FBXO34Q9NWN3 711 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 C1orf109Q9NX04 203 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 SH3BP4Q9P0V3 963 aa8.35□□□□□ -1.07
SNX17-207ENST00000489402 NTMQ9P121 344 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms