RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CA14Q9ULX7 337 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 ASB4Q9Y574 426 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 DRGXA6NNA5 263 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 HOXD12P35452 270 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CCINQ13939 588 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 DCST2Q5T1A1 773 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 TAS1R1Q7RTX1 841 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 SSX3Q99909 188 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 RBM24Q9BX46 236 aaKnown RBP16.57■□□□□ 0.24
NPHP4-209ENST00000489180 DNTTIP1Q9H147 329 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 TMEM45AQ9NWC5 275 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 VDAC3Q9Y277 283 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 PHLPP1O60346 1717 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 TSPAN15O95858 294 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 BMP4P12644 408 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CAV2P51636 162 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CNTN4Q8IWV2 1026 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 PRICKLE3O43900 615 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-209ENST00000489180 APBB3O95704 486 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 PNMTP11086 282 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF43P17038 809 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF33BQ06732 778 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 SYPL1Q16563 259 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 SNAPC3Q92966 411 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 SGCZQ96LD1 299 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 RPH3AQ9Y2J0 694 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-209ENST00000489180 GRXCR2A6NFK2 248 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 C17orf105B2RV13 164 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CRYZL1O95825 349 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 THEGLP0DJG4 465 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CPOXP36551 454 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 GPR19Q15760 415 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 ENTPD8Q5MY95 495 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 OR2G6Q5TZ20 316 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 TMEM151BQ8IW70 566 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 OR5L2Q8NGL0 311 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 BPIFA2Q96DR5 249 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 APMAPQ9HDC9 416 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 CD300AQ9UGN4 299 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 RHBDD3Q9Y3P4 386 aa16.57■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF254O75437 659 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 ALDH3B2P48448 385 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 SELENOVP59797 346 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 WDR5P61964 334 aaKnown RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 HNRNPKP61978 463 aaKnown RBP eCLIP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 HORMAD2Q8N7B1 307 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 DNAAF1Q8NEP3 725 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 STK35Q8TDR2 534 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 EGLN3Q9H6Z9 239 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 FANCFQ9NPI8 374 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 EMC3Q9P0I2 261 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 NCDNQ9UBB6 729 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 A0A0A6YYC8 382 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 OTOL1A6NHN0 477 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 I3L1I5 382 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CDK2P24941 298 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 THBS2P35442 1172 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 DYRK1AQ13627 763 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 PRAMEF8Q5VWM4 474 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 PRAMEF7Q5VXH5 474 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 B3GNT9Q6UX72 402 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 GPR148Q8TDV2 347 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF296Q8WUU4 475 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 F5H5K5 113 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CTHP32929 405 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 GPR50Q13585 617 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 TMEM163Q8TC26 289 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 SFXN5Q8TD22 340 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 MYLIPQ8WY64 445 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 MFFQ9GZY8 342 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 NAALAD2Q9Y3Q0 740 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 SYPP08247 313 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CLDN2P57739 230 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF529Q6P280 563 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 LILRB2Q8N423 598 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 TMEM185AQ8NFB2 350 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 OR52D1Q9H346 318 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 ZNF736B4DX44 427 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CASC3O15234 703 aaKnown RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 CSF1P09603 554 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 AKAIN1P0CW23 69 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 MAOBP27338 520 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 RETREG3Q86VR2 466 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 LSMEM2Q8N112 164 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 LILRA2Q8N149 483 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 FAM83FQ8NEG4 500 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-209ENST00000489180 ARRDC2Q8TBH0 407 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 BMFQ96LC9 184 aa16.56■□□□□ 0.24
NPHP4-209ENST00000489180 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 FAM227AF5H4B4 570 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 OPN1LWP04000 364 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 ALPLP05186 524 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 POLR2IP36954 125 aaKnown RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 SMAD2Q15796 467 aaKnown RBP16.55■□□□□ 0.24
NPHP4-209ENST00000489180 SHISA6Q6ZSJ9 500 aa16.55■□□□□ 0.24
NPHP4-209ENST00000489180 IL17RCQ8NAC3 791 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms