RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 GGNQ86UU5 652 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 ZNF614Q8N883 585 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 SFXN5Q8TD22 340 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 ADAMTS15Q8TE58 950 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 PGM2Q96G03 612 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 OR7D2Q96RA2 312 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 STACQ99469 402 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 CLEC4MQ9H2X3 399 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-206ENST00000489142 SERHL2Q9H4I8 314 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 DUSP22Q9NRW4 184 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 MED17Q9NVC6 651 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 ASIC5Q9NY37 505 aa12.62□□□□□ -0.39
VTI1A-206ENST00000489142 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-206ENST00000489142 FAF1Q9UNN5 650 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-206ENST00000489142 F8P00451 2351 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 C9JVG2 144 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 EIF1AYO14602 144 aaKnown RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 IL11P20809 199 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 ATP6V1C1P21283 382 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 DNAJA1P31689 397 aaKnown RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 EIF1AXP47813 144 aaKnown RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 ZNF41P51814 821 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 C21orf58P58505 322 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 ZNF117Q03924 483 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 POU4F3Q15319 338 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 PLPPR5Q32ZL2 321 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 KIF18BQ86Y91 864 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 OR4A15Q8NGL6 344 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 GOT1L1Q8NHS2 421 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 B4GALNT2Q8NHY0 566 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 POC1BQ8TC44 478 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 FAM222BQ8WU58 562 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 ARSGQ96EG1 525 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 DPY30Q9C005 99 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 OPN3Q9H1Y3 402 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 NEUROD4Q9HD90 331 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 RASSF1Q9NS23 344 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 FOXD3Q9UJU5 478 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 CARD8Q9Y2G2 431 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-206ENST00000489142 ACTL7BQ9Y614 415 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
VTI1A-206ENST00000489142 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 TNFRSF21O75509 655 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 AQP8O94778 261 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 CPSF4O95639 269 aaKnown RBP12.6□□□□□ -0.39
VTI1A-206ENST00000489142 NUDT14O95848 222 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 C1QCP02747 245 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 KITP10721 976 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-206ENST00000489142 SLC6A8P48029 635 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 EEFSECP57772 596 aaKnown RBP12.6□□□□□ -0.39
VTI1A-206ENST00000489142 PHC1P78364 1004 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 FOXF1Q12946 379 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 SGCBQ16585 318 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-206ENST00000489142 SPANXN4Q5MJ08 99 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 FBXW10Q5XX13 1052 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 CBLN3Q6UW01 205 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 CAMKMTQ7Z624 323 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 METTL25Q8N6Q8 603 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 SLC35G5Q96KT7 338 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 CLEC4AQ9UMR7 237 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 AP4B1Q9Y6B7 739 aa12.6□□□□□ -0.39
VTI1A-206ENST00000489142 HIVEP1P15822 2718 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 A0A087WZY1 265 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 GOLGA8QA0A0J9YX86 632 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 CENPVL1A0A0U1RR11 272 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 A0A1W2PQD3 144 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 GOLGA8OA6NCC3 632 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 A8MXE2 369 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 GOLGA8NF8WBI6 632 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 LINC01387J3KSC0 135 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SDHDO14521 159 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 TNFSF11O14788 317 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 ANKRD28O15084 1053 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 KRT16P08779 473 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 ALDOCP09972 364 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 EPXP11678 715 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 ZNF17P17021 662 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 LBPP18428 481 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 MATN1P21941 496 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 PSMA4P25789 261 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SHC1P29353 583 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SFTPDP35247 375 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 PEX19P40855 299 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 ART1P52961 327 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms