RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 Q6ZSR9 355 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 LILRA2Q8N149 483 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 FBXL14Q8N1E6 418 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 CDYL2Q8N8U2 506 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 GATSQ8NAP1 163 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 POC1BQ8TC44 478 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 C16orf78Q8WTQ4 265 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 ZBTB8AQ96BR9 441 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 MUCL1Q96DR8 90 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 MRRFQ96E11 262 aaKnown RBP14.31□□□□□ -0.12
USP48-210ENST00000489108 KLHL15Q96M94 604 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 DHRS9Q9BPW9 319 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 DPH5Q9H2P9 285 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 PRSS50Q9UI38 385 aa14.31□□□□□ -0.12
USP48-210ENST00000489108 GNG14A0A1W2PPG7 69 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 C7orf72A4D263 438 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 MYO1GB0I1T2 1018 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 KCNAB3O43448 404 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 PCDH7O60245 1069 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 LY6HO94772 140 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 PRKD3O94806 890 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 CFPP27918 469 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 SLC18A2Q05940 514 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 ZNHIT3Q15649 155 aaPredicted RBP14.3□□□□□ -0.12
USP48-210ENST00000489108 TCHHL1Q5QJ38 904 aaPredicted RBP14.3□□□□□ -0.12
USP48-210ENST00000489108 TRABD2AQ86V40 505 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 TDRPQ86YL5 185 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 MUC15Q8N387 334 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 OR4C3Q8NH37 302 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 MSI2Q96DH6 328 aaKnown RBP14.3□□□□□ -0.12
USP48-210ENST00000489108 LMF2Q9BU23 707 aaKnown RBP14.3□□□□□ -0.12
USP48-210ENST00000489108 VPS11Q9H270 941 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
USP48-210ENST00000489108 ZNF225Q9UK10 706 aa14.3□□□□□ -0.12
USP48-210ENST00000489108 ALG1L2C9J202 215 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 MANBAO00462 879 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 OR4F21O95013 312 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 PSMG1O95456 288 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 OTCP00480 354 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 HNF1AP20823 631 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 TYK2P29597 1187 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 FABP6P51161 128 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 ZNF41P51814 821 aaPredicted RBP14.29□□□□□ -0.12
USP48-210ENST00000489108 NCBP2P52298 156 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP48-210ENST00000489108 MANFP55145 182 aaKnown RBP14.29□□□□□ -0.12
USP48-210ENST00000489108 GGTLC2Q14390 218 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 C12orf54Q6X4T0 127 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 Q6ZT83 130 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 FCRLAQ7L513 359 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 ACTRT2Q8TDY3 377 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 PIK3R3Q92569 461 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 CPNE4Q96A23 557 aaPredicted RBP14.29□□□□□ -0.12
USP48-210ENST00000489108 APIPQ96GX9 242 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 SH3YL1Q96HL8 342 aaPredicted RBP14.29□□□□□ -0.12
USP48-210ENST00000489108 RADILQ96JH8 1075 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 PRR14Q9BWN1 585 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 L2HGDHQ9H9P8 463 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 GP6Q9HCN6 339 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 TIGARQ9NQ88 270 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 POU2F3Q9UKI9 436 aa14.29□□□□□ -0.12
USP48-210ENST00000489108 HEATR1Q9H583 2144 aaKnown RBP14.29□□□□□ -0.12
USP48-210ENST00000489108 GOLGA8QA0A0J9YX86 632 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 GOLGA8OA6NCC3 632 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 C9JVG2 144 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 GOLGA8NF8WBI6 632 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 H7C417 338 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 GOLGA8RI6L899 631 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 EFNA2O43921 213 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 KIAA0513O60268 411 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 KCNH1O95259 989 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 OXSR1O95747 527 aaPredicted RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 EDNRAP25101 427 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 STX2P32856 288 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 OR3A2P47893 321 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 EFNA4P52798 201 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 SPOCK1Q08629 439 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 NAB1Q13506 487 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 TIMM23BQ5SRD1 257 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 SLC22A25Q6T423 547 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 B3GLCTQ6Y288 498 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 MEX3DQ86XN8 651 aaKnown RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 OR2L13Q8N349 312 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 ZNF775Q96BV0 537 aaPredicted RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 ELP4Q96EB1 424 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 EBPLQ9BY08 206 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 C3orf14Q9HBI5 128 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 DDX18Q9NVP1 670 aaKnown RBP14.28□□□□□ -0.12
USP48-210ENST00000489108 TMCO1Q9UM00 188 aa14.28□□□□□ -0.12
USP48-210ENST00000489108 IGHV3-15A0A0B4J1V0 119 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 VWC2LB2RUY7 222 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 CCDC188H7C350 402 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 TCF21O43680 179 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 SMIM24O75264 130 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 PGM3O95394 542 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 RBP1P09455 135 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 CSF3P09919 207 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms