RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, human

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL9A2-208	ENST00000488463	ARSK	Q6UWY0	536 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	PLXDC2	Q6UX71	529 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	OLIG3	Q7RTU3	272 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	C9orf106	Q8NAJ2	232 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	RELL2	Q8NC24	303 aa	Predicted RBP	12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	OR10Q1	Q8NGQ4	319 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	ZNF524	Q96C55	264 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	NEURL3	Q96EH8	262 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	SFXN2	Q96NB2	322 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	INPP5K	Q9BT40	448 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	TRIM8	Q9BZR9	551 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	SLC6A13	Q9NSD5	602 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	ZNF337	Q9Y3M9	751 aa		12.84	□□□□□ -0.35
COL9A2-208	ENST00000488463	AKAP6	Q13023	2319 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	CENPVL1	A0A0U1RR11	272 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	SHISA8	B8ZZ34	492 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	FAM47E-STBD1	D6RA91	191 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463		H0YC42	278 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	HCRTR2	O43614	444 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	NDUFB5	O43674	189 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	FCMR	O60667	390 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	TGDS	O95455	350 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	HK1	P19367	917 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	MRPL19	P49406	292 aa	Known RBP	12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	CLK3	P49761	638 aa	Known RBP	12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	SUCLG1	P53597	346 aa	Known RBP	12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	TPD52	P55327	224 aa	Predicted RBP	12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	PPP2R2A	P63151	447 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	AAGAB	Q6PD74	315 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	ENPP6	Q6UWR7	440 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	GATS	Q8NAP1	163 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	GLB1L3	Q8NCI6	653 aa	Predicted RBP	12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	OR5M1	Q8NGP8	315 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	LRRC8C	Q8TDW0	803 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	CKAP2	Q8WWK9	683 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	SLC35G5	Q96KT7	338 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	TRIB1	Q96RU8	372 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	KCNJ16	Q9NPI9	418 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	ZIM2	Q9NZV7	527 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	ABCA4	P78363	2273 aa		12.83	□□□□□ -0.36
COL9A2-208	ENST00000488463	C7orf72	A4D263	438 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	CLCA1	A8K7I4	914 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	HSPB2	A8KAH6	182 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	UBD	O15205	165 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	SLC22A3	O75751	556 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	GUSB	P08236	651 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	IDH3A	P50213	366 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ATP12A	P54707	1039 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	CASP9	P55211	416 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	DLX5	P56178	289 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	CLDN20	P56880	219 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ZNF117	Q03924	483 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	SRY	Q05066	204 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	HSPB2	Q16082	182 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	GSTA3	Q16772	222 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	SLC25A35	Q3KQZ1	300 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ARHGAP11B	Q3KRB8	267 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	NXN	Q6DKJ4	435 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	CBLN3	Q6UW01	205 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	GGN	Q86UU5	652 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	MISP	Q8IVT2	679 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	MCEMP1	Q8IX19	187 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ARFGAP2	Q8N6H7	521 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	VPS37A	Q8NEZ2	397 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	OR9I1	Q8NGQ6	314 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	POC1B	Q8TC44	478 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	DTNBP1	Q96EV8	351 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	CHMP6	Q96FZ7	201 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	OR52E6	Q96RD3	313 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	EBF4	Q9BQW3	602 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	NMUR2	Q9GZQ4	415 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ZNF350	Q9GZX5	532 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	HOXD1	Q9GZZ0	328 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	OR51I1	Q9H343	314 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	PTGES2	Q9H7Z7	377 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	MED17	Q9NVC6	651 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	ICAM5	Q9UMF0	924 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	PCDHGB4	Q9UN71	923 aa		12.82	□□□□□ -0.36
COL9A2-208	ENST00000488463	MPDZ	O75970	2070 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463		A0A087WZY1	265 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	CCDC154	A6NI56	674 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	DUXA	A6NLW8	204 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463		H0Y3Z8	333 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	LINC01387	J3KSC0	135 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	HMGN4	O00479	90 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	SCD	O00767	359 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	GMFG	O60234	142 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	DIAPH2	O60879	1101 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	DNAJA2	O60884	412 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	TGM6	O95932	706 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	SNRPB2	P08579	225 aa	Known RBP	12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	LINGO3	P0C6S8	592 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	OR12D1	P0DN82	309 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	PEPD	P12955	493 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	COX6B1	P14854	86 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	GCK	P35557	465 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	RNF144A	P50876	292 aa	Predicted RBP	12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	MVD	P53602	400 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	PLAUR	Q03405	335 aa		12.81	□□□□□ -0.36
COL9A2-208	ENST00000488463	FOXF2	Q12947	444 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms