RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	POC1B	Q8TC44	478 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	ZNF764	Q96H86	408 aa	Predicted RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	TACO1	Q9BSH4	297 aa	Known RBP	13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	C12orf49	Q9H741	205 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	TMEM185B	Q9H7F4	350 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	UBQLN4	Q9NRR5	601 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	NTM	Q9P121	344 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	EMCN	Q9ULC0	261 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	CCL27	Q9Y4X3	112 aa		13.54	□□□□□ -0.24
NELFA-215	ENST00000488452	CSPG4	Q6UVK1	2322 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ZAN	Q9Y493	2812 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	RIPK2	O43353	540 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	TBX19	O60806	448 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	UROS	P10746	265 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ACP2	P11117	423 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	HPGD	P15428	266 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	PRPH2	P23942	346 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	SERPINB4	P48594	390 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	CLEC12B	Q2HXU8	276 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	CFAP157	Q5JU67	520 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	TMEM201	Q5SNT2	666 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	FRMD7	Q6ZUT3	714 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ZAR1	Q86SH2	424 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	CNPY4	Q8N129	248 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	SLC16A11	Q8NCK7	471 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	B4GALNT2	Q8NHY0	566 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	RAB3IL1	Q8TBN0	382 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ROBO4	Q8WZ75	1007 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	S100PBP	Q96BU1	408 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	GIMAP5	Q96F15	307 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	TRMT61A	Q96FX7	289 aa	Known RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	REXO5	Q96IC2	774 aa	Known RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	KLHL15	Q96M94	604 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	REEP4	Q9H6H4	257 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	TIGAR	Q9NQ88	270 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	FBXO34	Q9NWN3	711 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	ROS1	P08922	2347 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	TLN2	Q9Y4G6	2542 aa		13.53	□□□□□ -0.24
NELFA-215	ENST00000488452	FBN3	Q75N90	2809 aa		13.52	□□□□□ -0.24
NELFA-215	ENST00000488452		A0A1W2PQD3	144 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	RNF223	E7ERA6	249 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	NPIPB8	E9PQR5	432 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	OVOL3	O00110	214 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	SLC28A1	O00337	649 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	SCD	O00767	359 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	AKAP10	O43572	662 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	GCM2	O75603	506 aa	Predicted RBP	13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ALOX5	P09917	674 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	NID1	P14543	1247 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	IDUA	P35475	653 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	EIF1	P41567	113 aa	Known RBP	13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	FRK	P42685	505 aa	Predicted RBP	13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	DNAJB13	P59910	316 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	KRTAP1-1	Q07627	177 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ZNF844	Q08AG5	666 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ETFDH	Q16134	617 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	DUSP5	Q16690	384 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ZNF385B	Q569K4	471 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	NCMAP	Q5T1S8	102 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	HEPHL1	Q6MZM0	1159 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ZCCHC12	Q6PEW1	402 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	SZRD1	Q7Z422	152 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	GABRG1	Q8N1C3	465 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	CEP112	Q8N8E3	955 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	FBXO30	Q8TB52	745 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	MZB1	Q8WU39	189 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	HSD17B8	Q92506	261 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	PPCDC	Q96CD2	204 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	C16orf58	Q96GQ5	468 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	MS4A4E	Q96PG1	132 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	LRTM1	Q9HBL6	345 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	TNFRSF12A	Q9NP84	129 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	NGB	Q9NPG2	151 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	C1orf109	Q9NX04	203 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	SH3BP4	Q9P0V3	963 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	TBK1	Q9UHD2	729 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	RNF115	Q9Y4L5	304 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	SNX8	Q9Y5X2	465 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452	USF3	Q68DE3	2245 aa		13.52	□□□□□ -0.25
NELFA-215	ENST00000488452		A0A1W2PPM1	405 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	RGS14	O43566	566 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	GLRA3	O75311	464 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	HSPA4L	O95757	839 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	CD3E	P07766	207 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	LINGO3	P0C6S8	592 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	SFTPD	P35247	375 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	VEZF1	Q14119	521 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	RNPS1	Q15287	305 aa	Known RBP	13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	ZNF239	Q16600	458 aa	Known RBP	13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	SFRP5	Q5T4F7	317 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	NUFIP2	Q7Z417	695 aa	Known RBP	13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	TUSC5	Q8IXB3	177 aa		13.51	□□□□□ -0.25
NELFA-215	ENST00000488452	COX18	Q8N8Q8	333 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms