RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FNDC7Q5VTL7 733 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 REEP3Q6NUK4 255 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ARPINQ7Z6K5 226 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 KRT73Q86Y46 540 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SIAH3Q8IW03 269 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 TMCO5AQ8N6Q1 288 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 C11orf65Q8NCR3 313 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 OR14L1PQ8NHC6 308 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 B4GALNT2Q8NHY0 566 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 NFKBIDQ8NI38 313 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 BBS10Q8TAM1 723 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 OIT3Q8WWZ8 545 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SLC38A1Q9H2H9 487 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 IKZF5Q9H5V7 419 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 PIF1Q9H611 641 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 TMEM38AQ9H6F2 299 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ZNF703Q9H7S9 590 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ZDHHC11Q9H8X9 412 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 SUCOQ9UBS9 1254 aaKnown RBP14.34□□□□□ -0.11
C9orf3-219ENST00000488186 ANGPT4Q9Y264 503 aa14.34□□□□□ -0.11
C9orf3-219ENST00000488186 FLNCQ14315 2725 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 TRGV5A0A0B4J1U4 118 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 CSTAP01040 98 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 ARAFP10398 606 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 UBL4AP11441 157 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 DPP4P27487 766 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 CPA2P48052 419 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 DSCR4P56555 118 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-219ENST00000488186 RBBP4Q09028 425 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 KRT72Q14CN4 511 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 LARS2Q15031 903 aaKnown RBP14.33□□□□□ -0.12
C9orf3-219ENST00000488186 RABL3Q5HYI8 236 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 PRAMEF8Q5VWM4 474 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 PRAMEF7Q5VXH5 474 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 ARHGAP11AQ6P4F7 1023 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 SERPINA11Q86U17 422 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 SLC30A8Q8IWU4 369 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 FITM2Q8N6M3 262 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 OR2M3Q8NG83 312 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 OR52P1PQ8NH57 321 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 WDR60Q8WVS4 1066 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 NTNG2Q96CW9 530 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 NSL1Q96IY1 281 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF607Q96SK3 696 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 TREX2Q9BQ50 279 aaPredicted RBP14.33□□□□□ -0.12
C9orf3-219ENST00000488186 SPATA5L1Q9BVQ7 753 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 SPATA9Q9BWV2 254 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 RTN4RQ9BZR6 473 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 QRSL1Q9H0R6 528 aaKnown RBP14.33□□□□□ -0.12
C9orf3-219ENST00000488186 KAT8Q9H7Z6 458 aaKnown RBP14.33□□□□□ -0.12
C9orf3-219ENST00000488186 ACKR4Q9NPB9 350 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 ARL8BQ9NVJ2 186 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 TAS2R10Q9NYW0 307 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 FBXL2Q9UKC9 423 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 SLC35A3Q9Y2D2 325 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 CARD8Q9Y2G2 431 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 HIVEP3Q5T1R4 2406 aa14.33□□□□□ -0.12
C9orf3-219ENST00000488186 A0A1B0GTH9 108 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 NPIPB9F8W1W9 429 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 FXYD1O00168 92 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF264O43296 627 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 EIF4E2O60573 245 aaKnown RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 HCN1O60741 890 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 PGM3O95394 542 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ZIC2O95409 532 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 HPNP05981 417 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 CELA3AP09093 270 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ABOP16442 354 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 HK1P19367 917 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 TCEA1P23193 301 aaKnown RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 SRD5A2P31213 254 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 CCR4P51679 360 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ZNF41P51814 821 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 TDGF1P3P51864 188 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 CASP6P55212 293 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 KCNJ10P78508 379 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 GANABQ14697 944 aaKnown RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 CD226Q15762 336 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 MAPK14Q16539 360 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 RPS26P11Q5JNZ5 115 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 HACD2Q6Y1H2 254 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 YRDCQ86U90 279 aaKnown RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 IFNEQ86WN2 208 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 HIPK4Q8NE63 616 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 FAM83FQ8NEG4 500 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-219ENST00000488186 TOR1AIP2Q8NFQ8 470 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ZG16BQ96DA0 208 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 RUBCNLQ9H714 662 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 ACAD8Q9UKU7 415 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 IFT52Q9Y366 437 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 BAHCC1Q9P281 2608 aa14.32□□□□□ -0.12
C9orf3-219ENST00000488186 AGAP5A6NIR3 686 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 C17orf51A8MQB3 221 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 SUSD5O60279 629 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 SERPINB7O75635 380 aa14.31□□□□□ -0.12
C9orf3-219ENST00000488186 CBX6O95503 412 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms