RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 POM121CA8CG34 1229 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 SMAD7O15105 426 aaKnown RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ADAMDEC1O15204 470 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 NDUFB5O43674 189 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 TBX19O60806 448 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 SEC22BO75396 215 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 SYNGR4O95473 234 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 OXSR1O95747 527 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PROCP04070 461 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 THBDP07204 575 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 UROSP10746 265 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PAX1P15863 534 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 IL11P20809 199 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ME2P23368 584 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PSMA4P25789 261 aaKnown RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 LCN1P31025 176 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 GPC1P35052 558 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 FRKP42685 505 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 RNF144AP50876 292 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ZNF41P51814 821 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 DNAJB13P59910 316 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 RAC1P63000 192 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 KIAA0040Q15053 153 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PLPPR5Q32ZL2 321 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CCDC153Q494R4 210 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CFAP157Q5JU67 520 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 STAC2Q6ZMT1 411 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ZNF704Q6ZNC4 412 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ESPNLQ6ZVH7 1005 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PLEKHM3Q6ZWE6 761 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 SZRD1Q7Z422 152 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 STK32CQ86UX6 486 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 MISPQ8IVT2 679 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 IFT20Q8IY31 132 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 OR6Y1Q8NGX8 325 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 OR4C3Q8NH37 302 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 OR2V1Q8NHB1 315 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CEP70Q8NHQ1 597 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ACTRT2Q8TDY3 377 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 TMEM171Q8WVE6 324 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 SLC9A6Q92581 669 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CIDECQ96AQ7 238 aaPredicted RBP7.64□□□□□ -1.19
PRKCB-208ENST00000487674 PPCDCQ96CD2 204 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 EGLN2Q96KS0 407 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 FCRL1Q96LA6 429 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 RNF145Q96MT1 663 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ACTR6Q9GZN1 396 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 OR10A4Q9H209 315 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CXorf56Q9H5V9 222 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 LRTM1Q9HBL6 345 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 TNFRSF12AQ9NP84 129 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 MED17Q9NVC6 651 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 C1orf109Q9NX04 203 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 NTMQ9P121 344 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 TBK1Q9UHD2 729 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 CLEC4AQ9UMR7 237 aa7.64□□□□□ -1.19
PRKCB-208ENST00000487674 ZANQ9Y493 2812 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 A0A1W2PQD3 144 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 SLC28A1O00337 649 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 SCDO00767 359 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 TNFSF11O14788 317 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 HS3ST1O14792 307 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 KLF4O43474 513 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 RGS14O43566 566 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 CXCL13O43927 109 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PLIN3O60664 434 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 KCNK2O95069 426 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 CNOT4O95628 575 aaKnown RBP7.63□□□□□ -1.19
PRKCB-208ENST00000487674 HSPA4LO95757 839 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 TUBBP07437 444 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 ACP2P11117 423 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 NEFHP12036 1026 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 HPGDP15428 266 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 SDC1P18827 310 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PSMB1P20618 241 aaKnown RBP7.63□□□□□ -1.19
PRKCB-208ENST00000487674 ELK4P28324 431 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PCSK6P29122 969 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 AGTR1P30556 359 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PPP2R2BQ00005 443 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 SLC18A2Q05940 514 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PDE7AQ13946 482 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 DUSP5Q16690 384 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 ZNF385BQ569K4 471 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 PDSS1Q5T2R2 415 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 CLEC6AQ6EIG7 209 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 ANKRD26P1Q6NSI1 321 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 MFSD12Q6NUT3 480 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 RNF165Q6ZSG1 346 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 BEND4Q6ZU67 534 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 SH2D5Q6ZV89 423 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 GALNT10Q86SR1 603 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 EXOC3L1Q86VI1 746 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 ZNF611Q8N823 705 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 COX18Q8N8Q8 333 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 GATSQ8NAP1 163 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 NUP43Q8NFH3 380 aa7.63□□□□□ -1.19
PRKCB-208ENST00000487674 FBXO30Q8TB52 745 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms