RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 BLOC1S5Q8TDH9 187 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 NUDCD2Q8WVJ2 157 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 NELFBQ8WX92 580 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 MRPL24Q96A35 216 aaKnown RBP3.82□□□□□ -1.8
CNN3-206ENST00000487539 OTULINQ96BN8 352 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 BTBD9Q96Q07 612 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 RASL10BQ96S79 203 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 TRAF4Q9BUZ4 470 aaPredicted RBP3.82□□□□□ -1.8
CNN3-206ENST00000487539 UGT2B28Q9BY64 529 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 XPO4Q9C0E2 1151 aaKnown RBP3.82□□□□□ -1.8
CNN3-206ENST00000487539 KLHL4Q9C0H6 718 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 ZWILCHQ9H900 591 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 EIF2B3Q9NR50 452 aaKnown RBP3.82□□□□□ -1.8
CNN3-206ENST00000487539 MDFICQ9P1T7 246 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 POLG2Q9UHN1 485 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 RCOR1Q9UKL0 485 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 PCDHGB3Q9Y5G1 929 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 KLK4Q9Y5K2 254 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 FAM169AQ9Y6X4 670 aa3.82□□□□□ -1.8
CNN3-206ENST00000487539 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.82□□□□□ -1.8
CNN3-206ENST00000487539 A0A1W2PNV4 684 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 LRRD1A4D1F6 860 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 LRP5LA4QPB2 252 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 AGAP14A8MT82 685 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 C16orf97H3BN30 126 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 PIN1P1O15428 100 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CLOCKO15516 846 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 RAMP1O60894 148 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 TGM6O95932 706 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 ADAP00813 363 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 POU2F1P14859 743 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CCNCP24863 283 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 BDKRB1P46663 353 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CENPAP49450 140 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 HILS1P60008 231 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 MPP1Q00013 466 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 SRYQ05066 204 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 RPA4Q13156 261 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CUL4AQ13619 759 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 ITGA9Q13797 1035 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 HNF4GQ14541 408 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 DPYSL2Q16555 572 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 SLC18A3Q16572 532 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 BEX5Q5H9J7 111 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 DCUN1D2Q6PH85 259 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CLEC2AQ6UVW9 174 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CLEC17AQ6ZS10 378 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 Q6ZTC4 211 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 VN1R4Q7Z5H5 301 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 PIANPQ8IYJ0 282 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 LRRC25Q8N386 305 aaPredicted RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 KBTBD8Q8NFY9 601 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 OR4K2Q8NGD2 314 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 LKAAEAR1Q8TD35 194 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 TMEM170AQ8WVE7 144 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 ELMO1Q92556 727 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 SYN2Q92777 582 aaPredicted RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 NCLNQ969V3 563 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 PGM2Q96G03 612 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 DCUN1D1Q96GG9 259 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 JSRP1Q96MG2 331 aaPredicted RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 TSGA13Q96PP4 275 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 SFXN3Q9BWM7 321 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 CALHM2Q9HA72 323 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 ACKR4Q9NPB9 350 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 MED29Q9NX70 200 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 NLKQ9UBE8 527 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 PCYOX1Q9UHG3 505 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 RUVBL2Q9Y230 463 aaKnown RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 R3HDM2Q9Y2K5 976 aaKnown RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 YARS2Q9Y2Z4 477 aaKnown RBP3.81□□□□□ -1.8
CNN3-206ENST00000487539 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 PLCE1Q9P212 2302 aa3.81□□□□□ -1.8
CNN3-206ENST00000487539 IGLV3-16A0A075B6K0 115 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 IGHV4-28A0A0C4DH34 117 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 FAM237AA0A1B0GTK4 181 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 LOC285095A0A1B0GVY8 99 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 A0A1W2PP18 115 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 SLCO1B7G3V0H7 640 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 H0YIG0 161 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 TRIM77I1YAP6 450 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 GFYI3L273 518 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 PES1O00541 588 aaKnown RBP3.8□□□□□ -1.8
CNN3-206ENST00000487539 HAT1O14929 419 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 STX7O15400 261 aaKnown RBP3.8□□□□□ -1.8
CNN3-206ENST00000487539 TRAPPC6AO75865 159 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 MYO1DO94832 1006 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 NSA2O95478 260 aaKnown RBP3.8□□□□□ -1.8
CNN3-206ENST00000487539 CGAP01215 116 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 SLC25A16P16260 332 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 MYF6P23409 242 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 PTPN6P29350 595 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 DCTDP32321 178 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 NSFP46459 744 aaKnown RBP3.8□□□□□ -1.8
CNN3-206ENST00000487539 STARP49675 285 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 KLK7P49862 253 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 NAGLUP54802 743 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 DSCR9P59020 149 aa3.8□□□□□ -1.8
CNN3-206ENST00000487539 SEC61A1P61619 476 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms