RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SERHL2Q9H4I8 314 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 SDR39U1Q9NRG7 319 aaPredicted RBP9.28□□□□□ -0.92
NEK4-204ENST00000487068 CCDC167Q9P0B6 97 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 TRIM33Q9UPN9 1127 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 KCNE3Q9Y6H6 103 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 DOPEY1Q5JWR5 2465 aa9.28□□□□□ -0.92
NEK4-204ENST00000487068 FAM234BA2RU67 622 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 ALG1L2C9J202 215 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 SEC14L5O43304 696 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 SCN2BO60939 215 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 STX11O75558 287 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 CLDN14O95500 239 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 KRT75O95678 551 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 ACTL6AO96019 429 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 TBXA2RP21731 343 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 PTGER4P35408 488 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 CRATP43155 626 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 GAS1P54826 345 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 SQLEQ14534 574 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 SF3B4Q15427 424 aaKnown RBP eCLIP9.27□□□□□ -0.93
NEK4-204ENST00000487068 ZNF630Q2M218 657 aaPredicted RBP9.27□□□□□ -0.93
NEK4-204ENST00000487068 PDZK1Q5T2W1 519 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 VASNQ6EMK4 673 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 APOOLQ6UXV4 268 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 MARVELD2Q8N4S9 558 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 OR5M1Q8NGP8 315 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 NEURL3Q96EH8 262 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 C1GALT1C1Q96EU7 318 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 DMRTA2Q96SC8 542 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 TIMP4Q99727 224 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 PIGQQ9BRB3 760 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 SIKE1Q9BRV8 207 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 TTYH2Q9BSA4 534 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 PRR14Q9BWN1 585 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 HOXD1Q9GZZ0 328 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 FGFR1OP2Q9NVK5 253 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 MKLN1Q9UL63 735 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 RNF6Q9Y252 685 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 WDR45Q9Y484 360 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 FAM215AQ9Y5M1 114 aa9.27□□□□□ -0.93
NEK4-204ENST00000487068 A0A1W2PQD3 144 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 TMEM247A6NEH6 219 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ADAM10O14672 748 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 TNFRSF21O75509 655 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 IL2RAP01589 272 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 NGFRP08138 427 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 HOXD4P09016 255 aaPredicted RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 UBL4AP11441 157 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 HTR1EP28566 365 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 CHRNB4P30926 498 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 STARP49675 285 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ATP12AP54707 1039 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 GUCY1A3Q02108 690 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ZNF117Q03924 483 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 CD226Q15762 336 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ARHGAP11BQ3KRB8 267 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ACSF3Q4G176 576 aaPredicted RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 AGKQ53H12 422 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 NHSL2Q5HYW2 709 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 EXOSC6Q5RKV6 272 aaKnown RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 SLC2A7Q6PXP3 512 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 OLIG3Q7RTU3 272 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 P4HA3Q7Z4N8 544 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 MTERF4Q7Z6M4 381 aaKnown RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 LACC1Q8IV20 430 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 CCDC71Q8IV32 467 aaPredicted RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 FADS6Q8N9I5 356 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 GOT1L1Q8NHS2 421 aaPredicted RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 B4GALNT2Q8NHY0 566 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 FAM110BQ8TC76 370 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 RNF138Q8WVD3 245 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ASB5Q8WWX0 329 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 ROPN1LQ96C74 230 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 SPDL1Q96EA4 605 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 SDF2Q99470 211 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 TMEM120AQ9BXJ8 343 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 PRDM14Q9GZV8 571 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 CACYBPQ9HB71 228 aaKnown RBP9.26□□□□□ -0.93
NEK4-204ENST00000487068 STOML1Q9UBI4 398 aa9.26□□□□□ -0.93
NEK4-204ENST00000487068 OR2M5A3KFT3 312 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 AHRRA9YTQ3 701 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 B4DXG7 233 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 H6PDO95479 791 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 CSTAP01040 98 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 BCHEP06276 602 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 SNRPB2P08579 225 aaKnown RBP9.25□□□□□ -0.93
NEK4-204ENST00000487068 UBTFL6P0CB48 400 aaPredicted RBP9.25□□□□□ -0.93
NEK4-204ENST00000487068 GLI4P10075 376 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 NR2F1P10589 423 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 PEPDP12955 493 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 AGAP20933 346 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 ME2P23368 584 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 CHMP24386 653 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 GFRA1P56159 465 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 ART3Q13508 389 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 NDUFAF6Q330K2 333 aa9.25□□□□□ -0.93
NEK4-204ENST00000487068 GTDC1Q4AE62 458 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms