RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SLC43A2Q8N370 569 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 ACTRT1Q8TDG2 376 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 SLC9A6Q92581 669 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 OSTF1Q92882 214 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 GCDHQ92947 438 aaPredicted RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 TM4SF18Q96CE8 201 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 RNF145Q96MT1 663 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 CDK15Q96Q40 435 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 INPP5KQ9BT40 448 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 TMEM185BQ9H7F4 350 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 NOL11Q9H8H0 719 aaKnown RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 FKRPQ9H9S5 495 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 BRF2Q9HAW0 419 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 MYNNQ9NPC7 610 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 NPAP1Q9NZP6 1156 aa6.76□□□□□ -1.33
PDPN-205ENST00000487038 TMEFF2Q9UIK5 374 aaPredicted RBP6.76□□□□□ -1.33
PDPN-205ENST00000487038 CMYA5Q8N3K9 4069 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 IGHV4-61A0A0C4DH41 118 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 A0A0J9YW62 118 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 OR5H1A6NKK0 313 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 FAM157AC9JC47 383 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 TRIM77I1YAP6 450 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 KIF2AO00139 706 aaPredicted RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 SMAD9O15198 467 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 UTS2O95399 124 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 MTHFD2P13995 350 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 HPGDP15428 266 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 COX5AP20674 150 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 CD40P25942 277 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 APOBEC3AP31941 199 aaPredicted RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 SFTPDP35247 375 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 EIF1P41567 113 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 OR3A2P47893 321 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 CHN2P52757 468 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 SNRPD2P62316 118 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 GALNT1Q10472 559 aaPredicted RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 FASTKD3Q14CZ7 662 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 PLPPR5Q32ZL2 321 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 GGTA1PQ4G0N0 100 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 CPTPQ5TA50 214 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 GRTP1Q5TC63 336 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 CMC1Q7Z7K0 106 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 MISPQ8IVT2 679 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 LILRA2Q8N149 483 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 SEMA6DQ8NFY4 1073 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 OR7G2Q8NG99 324 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 ACTRT2Q8TDY3 377 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 ZNF418Q8TF45 676 aaPredicted RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 SELENOMQ8WWX9 145 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 EXOSC8Q96B26 276 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 DDX18Q9NVP1 670 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 FLRT3Q9NZU0 649 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 CPSF2Q9P2I0 782 aaKnown RBP6.75□□□□□ -1.33
PDPN-205ENST00000487038 MCM8Q9UJA3 840 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 SNX6Q9UNH7 406 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 JRKLQ9Y4A0 524 aa6.75□□□□□ -1.33
PDPN-205ENST00000487038 A0A087WV62 115 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 GNG14A0A1W2PPG7 69 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 A0A1W2PRB8 838 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 CIB4A0PJX0 185 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 TTC36A6NLP5 189 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ZNF814B7Z6K7 855 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ALG1L2C9J202 215 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 E7ESA3 106 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 M0R1B8 84 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 OR7A17O14581 309 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 NME6O75414 186 aaPredicted RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 RAD51DO75771 328 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 LY6HO94772 140 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 PGM3O95394 542 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 NTN1O95631 604 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 OPN1LWP04000 364 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 IL3P08700 152 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PSMA4P25789 261 aaKnown RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 GSTM5P46439 218 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ZNF83P51522 516 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PHC1P78364 1004 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 SLC18A2Q05940 514 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 SPOCK1Q08629 439 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 DLG1Q12959 904 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 GRAMD1BQ3KR37 738 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PRR31Q5SQ13 230 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 B3GLCTQ6Y288 498 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 RINLQ6ZS11 566 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 CTAGE3PQ8IX95 158 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ZNF100Q8IYN0 542 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 C1orf52Q8N6N3 182 aaKnown RBP6.74□□□□□ -1.33
PDPN-205ENST00000487038 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 SPC24Q8NBT2 197 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 TOR1AIP2Q8NFQ8 470 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 OR52N5Q8NH56 324 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.74□□□□□ -1.33
PDPN-205ENST00000487038 FAM110BQ8TC76 370 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 ZFP90Q8TF47 636 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 PYROXD1Q8WU10 500 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 HPS1Q92902 700 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 BBS4Q96RK4 519 aa6.74□□□□□ -1.33
PDPN-205ENST00000487038 JMJD8Q96S16 334 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms