RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CPT1CQ8TCG5 803 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 SLC26A7Q8TE54 656 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 DUSP19Q8WTR2 217 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 RNF138Q8WVD3 245 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 SNRNP40Q96DI7 357 aaKnown RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 SH3YL1Q96HL8 342 aaPredicted RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 REXO5Q96IC2 774 aaKnown RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 TAAR6Q96RI8 345 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 KCTD14Q9BQ13 255 aaPredicted RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 QRSL1Q9H0R6 528 aaKnown RBP10.4□□□□□ -0.74
NUP50-216ENST00000486184 ALG2Q9H553 416 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 RUBCNLQ9H714 662 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 EXO5Q9H790 373 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 PROK2Q9HC23 129 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 BCL2L10Q9HD36 194 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 SLC35A3Q9Y2D2 325 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 C15orf41Q9Y2V0 281 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 IFT52Q9Y366 437 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.74
NUP50-216ENST00000486184 COL6A6A6NMZ7 2263 aa10.4□□□□□ -0.75
NUP50-216ENST00000486184 DSPPQ9NZW4 1301 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ELOVL7A1L3X0 281 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 PRORSD1PA6NEY8 169 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 SERINC4A6NH21 518 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 AGAP5A6NIR3 686 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 LRRC3CA6NJW4 275 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 NPIPA5E9PKD4 350 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 NPIPB9F8W1W9 429 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ZNF264O43296 627 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 SUV39H1O43463 412 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 HCRTR2O43614 444 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 GMFGO60234 142 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 CDC40O60508 579 aaKnown RBP eCLIP10.39□□□□□ -0.75
NUP50-216ENST00000486184 GMNNO75496 209 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 PGM3O95394 542 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ZIC2O95409 532 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 ETS2P15036 469 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 MSX1P28360 303 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 AQP1P29972 269 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 MAGEA5P43359 124 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 CCR4P51679 360 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ZNF41P51814 821 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 GAS1P54826 345 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 MLLT10P55197 1068 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 EEFSECP57772 596 aaKnown RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 C19orf57Q0VDD7 668 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 FGFBP1Q14512 234 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ADRM1Q16186 407 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 PRR30Q53SZ7 412 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 ZNF311Q5JNZ3 666 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 BNC2Q6ZN30 1099 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 PATL1Q86TB9 770 aaKnown RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 PTOV1Q86YD1 416 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 CMIPQ8IY22 773 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 MICU2Q8IYU8 434 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 DEFB107AQ8IZN7 70 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 B4GALNT2Q8NHY0 566 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 FAR1Q8WVX9 515 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 NR4A3Q92570 626 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 GNRHR2Q96P88 292 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 TSPAN10Q9H1Z9 355 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 DSN1Q9H410 356 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 LDAHQ9H6V9 325 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 ZNF703Q9H7S9 590 aaPredicted RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 ASF1BQ9NVP2 202 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 CMTM6Q9NX76 183 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 QPCTLQ9NXS2 382 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 SEC14L3Q9UDX4 400 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 SLC13A4Q9UKG4 626 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 RALYQ9UKM9 306 aaKnown RBP10.39□□□□□ -0.75
NUP50-216ENST00000486184 NPIPA1Q9UND3 350 aa10.39□□□□□ -0.75
NUP50-216ENST00000486184 PCNX3Q9H6A9 2034 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 ZFYVE26Q68DK2 2539 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 NME4O00746 187 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 EIF4E2O60573 245 aaKnown RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 GLSO94925 669 aaPredicted RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 IFNA14P01570 189 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 THBS1P07996 1170 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 PABPC4LP0CB38 370 aaKnown RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 UBTFL6P0CB48 400 aaPredicted RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 NID1P14543 1247 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 UQCRBP14927 111 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 RASSF2P50749 326 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 DSCR4P56555 118 aaPredicted RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 KCNJ10P78508 379 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 ZNF117Q03924 483 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 FOXO1Q12778 655 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 VEZF1Q14119 521 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 ELOAQ14241 798 aaKnown RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 GANABQ14697 944 aaKnown RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 SLC10A1Q14973 349 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 MAPK11Q15759 364 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 CD226Q15762 336 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 MAPK14Q16539 360 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 ZSWIM7Q19AV6 140 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 HYAL4Q2M3T9 481 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 EIPR1Q53HC9 387 aa10.38□□□□□ -0.75
NUP50-216ENST00000486184 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
NUP50-216ENST00000486184 C8orf82Q6P1X6 216 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms