RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ANKRD34AQ69YU3 496 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 OR2T5Q6IEZ7 315 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 TBPL2Q6SJ96 375 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 CBLN3Q6UW01 205 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 RPS19BP1Q86WX3 136 aaKnown RBP13.33□□□□□ -0.28
LRIF1-202ENST00000485275 OR2T29Q8NH02 315 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 THOC3Q96J01 351 aaKnown RBP13.33□□□□□ -0.28
LRIF1-202ENST00000485275 VPS50Q96JG6 964 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 STOML1Q9UBI4 398 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 MRTO4Q9UKD2 239 aaKnown RBP13.33□□□□□ -0.28
LRIF1-202ENST00000485275 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.28
LRIF1-202ENST00000485275 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 NGFRP08138 427 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 ICAM2P13598 275 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 KRT20P35900 424 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PTGDSP41222 190 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 RGS8P57771 180 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PSPHP78330 225 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PIN1Q13526 163 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 NTRK2Q16620 822 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 MARCH3Q86UD3 253 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 GRAMD2AQ8IUY3 354 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SLC22A8Q8TCC7 542 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SLC29A1Q99808 456 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 YY1AP1Q9H869 796 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 GALNT9Q9HCQ5 603 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 MAN2C1Q9NTJ4 1040 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF232Q9UNY5 417 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SLC9A8Q9Y2E8 581 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PCNX3Q9H6A9 2034 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 APC2O95996 2303 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SPENQ96T58 3664 aaKnown RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SCDO00767 359 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SOCS2O14508 198 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 AP3D1O14617 1153 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 GCKP35557 465 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 ACAA2P42765 397 aaKnown RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 LIMS1P48059 325 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 GAS1P54826 345 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 SKP2Q13309 424 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 EIPR1Q53HC9 387 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 FGF11Q92914 225 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 DHRS1Q96LJ7 313 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 HOXD1Q9GZZ0 328 aa13.32□□□□□ -0.28
LRIF1-202ENST00000485275 CHCHD2Q9Y6H1 151 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-202ENST00000485275 ARGFXA6NJG6 315 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 CPSF4LA6NMK7 179 aaKnown RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 SCO2O43819 266 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 CSTAP01040 98 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 NAGAP17050 411 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 HOXB6P17509 224 aaKnown RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 RHCEP18577 417 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 LCN1P31025 176 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ADH7P40394 386 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 CDH12P55289 794 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 SPIBQ01892 262 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF117Q03924 483 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 FOXD4Q12950 439 aaPredicted RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ENTPD8Q5MY95 495 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF227Q86WZ6 799 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 SLC5A8Q8N695 610 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 PHOSPHO1Q8TCT1 267 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 KCNE4Q8WWG9 221 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 FAM122AQ96E09 287 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 TRIM45Q9H8W5 580 aaPredicted RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 CACYBPQ9HB71 228 aaKnown RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ACER3Q9NUN7 267 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 ANKRD10Q9NXR5 420 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 CARD8Q9Y2G2 431 aa13.31□□□□□ -0.28
LRIF1-202ENST00000485275 YARS2Q9Y2Z4 477 aaKnown RBP13.31□□□□□ -0.28
LRIF1-202ENST00000485275 TRBV4-1A0A0J9YWV2 114 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 A0A1W2PQD3 144 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 DPM1O60762 260 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 UBL4AP11441 157 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF23P17027 643 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ZNF26P17031 533 aaPredicted RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ITGA2P17301 1181 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 MST1P26927 711 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ID4P47928 161 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 CDC20Q12834 499 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 AIMP2Q13155 320 aaKnown RBP13.3□□□□□ -0.28
LRIF1-202ENST00000485275 RAPSNQ13702 412 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 EFR3AQ14156 821 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 ACER2Q5QJU3 275 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 IL20RBQ6UXL0 311 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 CMIPQ8IY22 773 aa13.3□□□□□ -0.28
LRIF1-202ENST00000485275 BEST3Q8N1M1 668 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms