RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 AQP1P29972 269 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 MNAT1P51948 309 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 HNRNPFP52597 415 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 MRPS6P82932 125 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 VLDLRP98155 873 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 MAP2K1Q02750 393 aaPredicted RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 GGTLC2Q14390 218 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 KARSQ15046 597 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SYPL1Q16563 259 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ZSWIM7Q19AV6 140 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 PARP6Q2NL67 630 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 DNAJC21Q5F1R6 531 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 Q5W150 140 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 DLEU7Q6UYE1 221 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 P4HA3Q7Z4N8 544 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 GOLGA7Q7Z5G4 137 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SERPINA9Q86WD7 417 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SKA3Q8IX90 412 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 CCDC170Q8IYT3 715 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF560Q96MR9 790 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 FOPNLQ96NB1 174 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF670Q9BS34 389 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SIRPDQ9H106 197 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ZDHHC11Q9H8X9 412 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SH2D2AQ9NP31 389 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 UBQLN1Q9UMX0 589 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 SMC3Q9UQE7 1217 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 TEX264Q9Y6I9 313 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 IGHV3-64DA0A0J9YX35 117 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 HMOX1P09601 288 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 MUTP22033 750 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 HPDP32754 393 aaPredicted RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 MAGEA4P43358 317 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 RPS9P46781 194 aaKnown RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 RPL8P62917 257 aaKnown RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 IL9RQ01113 521 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 PPP1R8Q12972 351 aaKnown RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 NME3Q13232 169 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 LINC00483Q53H64 154 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 PAGE3Q5JUK9 113 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 FAM71E1Q6IPT2 247 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 TOM1L2Q6ZVM7 507 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF547Q8IVP9 402 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 ARHGDIGQ99819 225 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 RNF126Q9BV68 326 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 PLA2G12AQ9BZM1 189 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 CHIAQ9BZP6 476 aa2.01□□□□□ -2.09
SCAF11-207ENST00000484275 RBAKQ9NYW8 714 aaPredicted RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.01□□□□□ -2.09
SCAF11-207ENST00000484275 SMIM28A0A1B0GU29 152 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 TTC26A0AVF1 554 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 AKR7A3O95154 331 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 RETP07949 1114 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 IGFBP3P17936 291 aaPredicted RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 ADSSP30520 456 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 CTNNA1P35221 906 aaKnown RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 GCKP35557 465 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 LONP1P36776 959 aaKnown RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 CASP3P42574 277 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 KIR2DS2P43631 304 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 HTR5AP47898 357 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 SRP54P61011 504 aaKnown RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 RND3P61587 244 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 CFAP221Q4G0U5 840 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 CYBRD1Q53TN4 286 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 IYDQ6PHW0 289 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 ARSKQ6UWY0 536 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 OLFM4Q6UX06 510 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF836Q6ZNA1 936 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 NET1Q7Z628 596 aaPredicted RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 CERS5Q8N5B7 392 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 TMCO5AQ8N6Q1 288 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF615Q8N8J6 731 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF740Q8NDX6 193 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 TMEM185AQ8NFB2 350 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 OR9A1PQ8NGU1 263 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 SLC22A8Q8TCC7 542 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 COQ7Q99807 217 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 TMEM121Q9BTD3 319 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 PAK1IP1Q9NWT1 392 aaPredicted RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 RIMS3Q9UJD0 308 aa2□□□□□ -2.09
SCAF11-207ENST00000484275 PRPF19Q9UMS4 504 aaKnown RBP2□□□□□ -2.09
SCAF11-207ENST00000484275 DHX29Q7Z478 1369 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 GJE1A6NN92 205 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 PES1O00541 588 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 CASKO14936 926 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 SLC35G4P0C7Q5 338 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 TSPAN8P19075 237 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 NTSP30990 170 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 SLC6A8P48029 635 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 CSNK1DP48730 415 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 DHPSP49366 369 aaPredicted RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 ST3GAL3Q11203 375 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 PKN2Q16513 984 aaKnown RBP1.99□□□□□ -2.09
SCAF11-207ENST00000484275 CARTPTQ16568 116 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 PVRIGQ6DKI7 326 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 OR52W1Q6IF63 320 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 CYS1Q717R9 158 aa1.99□□□□□ -2.09
SCAF11-207ENST00000484275 LCA5Q86VQ0 697 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms