RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 EML6Q6ZMW3 1958 aa9.08□□□□□ -0.96
CPSF4-213ENST00000484112 IGLV3-32A0A0A0MS00 114 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 RNF103-CHMP3A0A140T963 221 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 A0A1W2PQD3 144 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 FAM234BA2RU67 622 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 AHRRA9YTQ3 701 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EEF1E1-BLOC1S5C9J1V9 151 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EEF1E1O43324 174 aaKnown RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 TRAPPC6AO75865 159 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 KCNK2O95069 426 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EPPINO95925 133 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 IL2RAP01589 272 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ZCCHC18P0CG32 403 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ACP2P11117 423 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EPXP11678 715 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 CYP4B1P13584 511 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 TBXA2RP21731 343 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 GDF1P27539 372 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 PTPN6P29350 595 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 GAS1P54826 345 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 NKX6-1P78426 367 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 C17orf67Q0P5P2 114 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 LASP1Q14847 261 aaKnown RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 DUSP5Q16690 384 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ACSF3Q4G176 576 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 FNDC7Q5VTL7 733 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ANGPTL8Q6UXH0 198 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 C6orf120Q7Z4R8 191 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 PMM1Q92871 262 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EFHD2Q96C19 240 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 NEURL3Q96EH8 262 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 PANX1Q96RD7 426 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 PTGES2Q9H7Z7 377 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EQTNQ9NQ60 294 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 POLE3Q9NRF9 147 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 UBQLN4Q9NRR5 601 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 EXD2Q9NVH0 621 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 FOXD3Q9UJU5 478 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ACANP16112 2415 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ABCA2Q9BZC7 2435 aa9.07□□□□□ -0.96
CPSF4-213ENST00000484112 ALG1L2C9J202 215 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 KRT75O95678 551 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ACTL6AO96019 429 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TROVE2P10155 538 aaKnown RBP eCLIP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 HPGDP15428 266 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ATP6V1C1P21283 382 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 MATN1P21941 496 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 IL12AP29459 219 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 SRD5A2P31213 254 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 HOXC12P31275 282 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 CEACAM8P31997 349 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 SOAT1P35610 550 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 POLR2JP52435 117 aaKnown RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ZNF136P52737 540 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 DSCR4P56555 118 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 PHC1P78364 1004 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 SQLEQ14534 574 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TOMM20Q15388 145 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 GLYR1Q49A26 553 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ATAD3BQ5T9A4 648 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 SAXO2Q658L1 398 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 BICRALQ6AI39 1079 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 LACC1Q8IV20 430 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 PM20D2Q8IYS1 436 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 CLECL1Q8IZS7 167 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 WDSUB1Q8N9V3 476 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ZNF527Q8NB42 609 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 PIK3R3Q92569 461 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 JADE3Q92613 823 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 C16orf58Q96GQ5 468 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ITCHQ96J02 903 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 SLC35G5Q96KT7 338 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TEX37Q96LM6 180 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 GNRHR2Q96P88 292 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 OR7D2Q96RA2 312 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TRIB1Q96RU8 372 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TIMP4Q99727 224 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 TBL1XR1Q9BZK7 514 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 OR2B2Q9GZK3 357 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 PLEKHF2Q9H8W4 249 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 THUMPD1Q9NXG2 353 aaKnown RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 PPP4R1LQ9P1A2 415 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ZNF629Q9UEG4 869 aaPredicted RBP9.06□□□□□ -0.96
CPSF4-213ENST00000484112 CAMK2AQ9UQM7 478 aa9.06□□□□□ -0.96
CPSF4-213ENST00000484112 ANKHD1Q8IWZ3 2542 aaKnown RBP9.05□□□□□ -0.96
CPSF4-213ENST00000484112 GXYLT2A0PJZ3 443 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 CCDC154A6NI56 674 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 CLCA1A8K7I4 914 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 KIAA1324LA8MWY0 1029 aaPredicted RBP9.05□□□□□ -0.96
CPSF4-213ENST00000484112 H3BNH8 94 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 SCDO00767 359 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 RFXANKO14593 260 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 GNB5O14775 395 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 STX11O75558 287 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 UTS2O95399 124 aa9.05□□□□□ -0.96
CPSF4-213ENST00000484112 CPSF4O95639 269 aaKnown RBP9.05□□□□□ -0.96
CPSF4-213ENST00000484112 LY6G6DO95868 133 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms