RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NPIPA7E9PJI5 369 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 TNFSF11O14788 317 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 KLF4O43474 513 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 SPAG7O75391 227 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 NGFRP08138 427 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 FGF4P08620 206 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 NPIPA8P0DM63 369 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 CREB1P16220 341 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 RPS3AP61247 264 aaKnown RBP16.13■□□□□ 0.17
ATG4B-221ENST00000483778 CPTPQ5TA50 214 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 DDIASQ8IXT1 998 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 GTPBP8Q8N3Z3 284 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-221ENST00000483778 TWIST2Q8WVJ9 160 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 CDS1Q92903 461 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 C18orf12Q96KH6 178 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 MS4A4EQ96PG1 132 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 ATP6V1HQ9UI12 483 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 PROCRQ9UNN8 238 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 CADP27708 2225 aa16.13■□□□□ 0.17
ATG4B-221ENST00000483778 ADAMDEC1O15204 470 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 PEX11AO75192 247 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 NTN1O95631 604 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 PLAUP00749 431 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 HMGN2P05204 90 aaKnown RBP16.12■□□□□ 0.17
ATG4B-221ENST00000483778 INHBBP09529 407 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 ALOX5P09917 674 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 PRIM2P49643 509 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 LTBQ06643 244 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 ACKR1Q16570 336 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 VPS26BQ4G0F5 336 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 STAC2Q6ZMT1 411 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 TRABD2AQ86V40 505 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 ZFP28Q8NHY6 868 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 ROBO4Q8WZ75 1007 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 PRRG4Q9BZD6 226 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 UBQLN4Q9NRR5 601 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 GIN1Q9NXP7 522 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 ZNF226Q9NYT6 803 aa16.12■□□□□ 0.17
ATG4B-221ENST00000483778 SLU7O95391 586 aaKnown RBP16.11■□□□□ 0.17
ATG4B-221ENST00000483778 LINGO3P0C6S8 592 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 NEFHP12036 1026 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 RAC1P63000 192 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 OCRLQ01968 901 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 LASP1Q14847 261 aaKnown RBP16.11■□□□□ 0.17
ATG4B-221ENST00000483778 NDUFAF6Q330K2 333 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 CBLN3Q6UW01 205 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 LRIG3Q6UXM1 1119 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 WDR75Q8IWA0 830 aaKnown RBP16.11■□□□□ 0.17
ATG4B-221ENST00000483778 KRTCAP2Q8N6L1 136 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 COX18Q8N8Q8 333 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 OR6Y1Q8NGX8 325 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 PPP1R14CQ8TAE6 165 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 JADE3Q92613 823 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 OSTF1Q92882 214 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 APOPT1Q96IL0 206 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 TRMOQ9BU70 441 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 C1orf50Q9BV19 199 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 BTBD2Q9BX70 525 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 CXorf36Q9H7Y0 433 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 ANKZF1Q9H8Y5 726 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 ZCCHC3Q9NUD5 404 aaKnown RBP16.11■□□□□ 0.17
ATG4B-221ENST00000483778 ZDHHC2Q9UIJ5 367 aa16.11■□□□□ 0.17
ATG4B-221ENST00000483778 A0A087WZY1 265 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 C7orf72A4D263 438 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 SCAMP2O15127 329 aaKnown RBP16.1■□□□□ 0.17
ATG4B-221ENST00000483778 NPHS1O60500 1241 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 SMPD2O60906 423 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 SS18L1O75177 396 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-221ENST00000483778 NID1P14543 1247 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 ZNF17P17021 662 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 POU6F2P78424 691 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-221ENST00000483778 ZNF117Q03924 483 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 PTGR1Q14914 329 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 TOMM34Q15785 309 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-221ENST00000483778 KLHL26Q53HC5 615 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 XKR7Q5GH72 579 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 Q5PR19 223 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.1■□□□□ 0.179e-11■■□□□ 13.2
ATG4B-221ENST00000483778 SHEQ5VZ18 495 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 BIVMQ86UB2 503 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 CNPY4Q8N129 248 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 OR2V1Q8NHB1 315 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 ACTRT2Q8TDY3 377 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 MTERF3Q96E29 417 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 PPCSQ9HAB8 311 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 MKS1Q9NXB0 559 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 TMED5Q9Y3A6 229 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 SNX8Q9Y5X2 465 aa16.1■□□□□ 0.17
ATG4B-221ENST00000483778 LY6G6DO95868 133 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 C6orf47O95873 294 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 CHEK2O96017 543 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 ADSLP30566 484 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-221ENST00000483778 SFTPDP35247 375 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 ASMTP46597 345 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 CCT3P49368 545 aaKnown RBP16.09■□□□□ 0.17
ATG4B-221ENST00000483778 CTBP2P56545 445 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 MLC1Q15049 377 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 C6orf136Q5SQH8 315 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 HBMQ6B0K9 141 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 ZCCHC12Q6PEW1 402 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms