RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ITCHQ96J02 903 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 UCN2Q96RP3 112 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 CCDC134Q9H6E4 229 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 SLC6A13Q9NSD5 602 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 DTNAQ9Y4J8 743 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 ADGRG4Q8IZF6 3080 aa16.3■□□□□ 0.2
HDAC6-225ENST00000483506 NPIPA5A0A0B4J1W7 369 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 A0A0G2JNJ9 132 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 CD8B2A6NJW9 211 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 NPIPA7E9PJI5 369 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 HMGN4O00479 90 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 KIAA0513O60268 411 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 KRT75O95678 551 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 NPIPA8P0DM63 369 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF17P17021 662 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-225ENST00000483506 HTR1EP28566 365 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 TIMP3P35625 211 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 ADH7P40394 386 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 ANXA11P50995 505 aaKnown RBP16.29■□□□□ 0.2
HDAC6-225ENST00000483506 MVDP53602 400 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 CASP9P55211 416 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 SQLEQ14534 574 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 CRYBG3Q68DQ2 2970 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 C16orf62Q7Z3J2 963 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 LILRB4Q8NHJ6 448 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 RFWD2Q8NHY2 731 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 VPS33AQ96AX1 596 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 PIGQQ9BRB3 760 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF385DQ9H6B1 395 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 CALHM2Q9HA72 323 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 NPHS2Q9NP85 383 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 SLC52A3Q9NQ40 469 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 ALKBH4Q9NXW9 302 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 Q9UFV3 132 aa16.29■□□□□ 0.2
HDAC6-225ENST00000483506 RPH3AQ9Y2J0 694 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-225ENST00000483506 OR2M5A3KFT3 312 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 PRAMEF27A3QJZ7 478 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 MBD3L4A6NDZ8 208 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 MBD3L3A6NE82 208 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 MBD3L5A6NJ08 208 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 PRSS44E7EML9 344 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 H3BNH8 94 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 FCMRO60667 390 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 TOXO94900 526 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 GSNP06396 782 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 CEACAM8P31997 349 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 SUMO3P55854 103 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF117Q03924 483 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 RAET1LQ5VY80 246 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 HIST2H2BCQ6DN03 193 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 ARSKQ6UWY0 536 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 GTPBP8Q8N3Z3 284 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 GATSQ8NAP1 163 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 MBD3L2Q8NHZ7 208 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-225ENST00000483506 CA5BP1Q8WTZ4 195 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 RAB8BQ92930 207 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 ZBTB8AQ96BR9 441 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 ROPN1LQ96C74 230 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 CHST11Q9NPF2 352 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 KCNE5Q9UJ90 142 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 ICAM5Q9UMF0 924 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 LIPT1Q9Y234 373 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 CELSR2Q9HCU4 2923 aa16.28■□□□□ 0.2
HDAC6-225ENST00000483506 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 DOCK7Q96N67 2140 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 KDM4EB2RXH2 506 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-225ENST00000483506 HCRTR2O43614 444 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 TNFRSF21O75509 655 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 UGT2B17O75795 530 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 PEPDP12955 493 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 COL8A1P27658 744 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 STARP49675 285 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 PLPPR5Q32ZL2 321 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 PDZK1Q5T2W1 519 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 DNAJC14Q6Y2X3 702 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-225ENST00000483506 FRRS1Q6ZNA5 592 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 CCDC71Q8IV32 467 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-225ENST00000483506 ACBD4Q8NC06 268 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 PHOSPHO1Q8TCT1 267 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 TRNT1Q96Q11 434 aaKnown RBP16.27■□□□□ 0.2
HDAC6-225ENST00000483506 TUBA1CQ9BQE3 449 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 PAIP1Q9H074 479 aaKnown RBP16.27■□□□□ 0.2
HDAC6-225ENST00000483506 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 TPT1P8Q9HAU6 139 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 MED17Q9NVC6 651 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 CCDC167Q9P0B6 97 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 DCTN4Q9UJW0 460 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 ZNF337Q9Y3M9 751 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 WDR45Q9Y484 360 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 GMEB1Q9Y692 573 aa16.27■□□□□ 0.2
HDAC6-225ENST00000483506 A0A096LPI6 279 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 SERINC4A6NH21 518 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 HSPB2A8KAH6 182 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms