RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RNF11Q9Y3C5 154 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 TESMINQ9Y4I5 508 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF780BQ9Y6R6 833 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ACANP16112 2415 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 UQCRHLA0A096LP55 91 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 A0A096LPK6 155 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 A0A1W2PNV4 684 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 A0A1W2PPR1 153 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 FRG2CA6NGY1 282 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 LRRC14BA6NHZ5 514 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 OR6C70A6NIJ9 312 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TO15178 435 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 UGT2B11O75310 529 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 REM1O75628 298 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TNFSF13O75888 250 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 BCAS2O75934 225 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 KLHL2O95198 593 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 SIX3O95343 332 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ESRRBO95718 433 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 GASTP01350 101 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 POU2F1P14859 743 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF708P17019 499 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 S1PR1P21453 382 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 DRD5P21918 477 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PEX2P28328 305 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PCSK6P29122 969 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 IL12BP29460 328 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TYK2P29597 1187 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 FEN1P39748 380 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PTGDSP41222 190 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 MAGEA4P43358 317 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PPICP45877 212 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 KCNJ5P48544 419 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PCYT1AP49585 367 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 STARP49675 285 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 LHX2P50458 406 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CCNG1P51959 295 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PLTPP55058 493 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 EEFSECP57772 596 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 GPX6P59796 221 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 RAB1AP62820 205 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 MRPS22P82650 360 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 HMGCS1Q01581 520 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CAV1Q03135 178 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 FAM27E3Q08E93 113 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 EFR3AQ14156 821 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 FGFBP1Q14512 234 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 EXOSC7Q15024 291 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 BCL2A1Q16548 175 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ACKR1Q16570 336 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PRICKLE4Q2TBC4 344 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 SLC48A1Q6P1K1 146 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 FAM111BQ6SJ93 734 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 LARP4Q71RC2 724 aaKnown RBP eCLIP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 COMMD6Q7Z4G1 85 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 YTHDF3Q7Z739 585 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CCDC25Q86WR0 208 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CENPLQ8N0S6 344 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 METTL4Q8N3J2 472 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CNEP1R1Q8N9A8 125 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 WDSUB1Q8N9V3 476 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 OR4K17Q8NGC6 315 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 OR52R1Q8NGF1 315 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 LRTOMTQ8WZ04 291 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TMBIM1Q969X1 311 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 KLHL29Q96CT2 875 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PIK3IP1Q96FE7 263 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 AJUBAQ96IF1 538 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 CLPTM1LQ96KA5 538 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 COL21A1Q96P44 957 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ARPC5LQ9BPX5 153 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 SLC39A3Q9BRY0 314 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 LRRC1Q9BTT6 524 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 NTMT1Q9BV86 223 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 MRPL1Q9BYD6 325 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PFDN4Q9NQP4 134 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 NMRK1Q9NWW6 199 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 KLHL28Q9NXS3 571 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ELOVL5Q9NYP7 299 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 MAT2BQ9NZL9 334 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 EHD3Q9NZN3 535 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF639Q9UID6 485 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 TMCO1Q9UM00 188 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 SLC12A4Q9UP95 1085 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 DTX4Q9Y2E6 619 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 PLLPQ9Y342 182 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 UTP11Q9Y3A2 253 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 MRPS18CQ9Y3D5 142 aaKnown RBP5.3□□□□□ -1.56
CSDE1-207ENST00000483407 WIF1Q9Y5W5 379 aa5.3□□□□□ -1.56
CSDE1-207ENST00000483407 SLC22A20A6NK97 555 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 DEFB108AA8MXU0 73 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 C16orf97H3BN30 126 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 STX16-NPEPL1H3BU86 382 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 OR7A17O14581 309 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 STX16O14662 325 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 RAD51CO43502 376 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 FRS3O43559 492 aa5.29□□□□□ -1.56
CSDE1-207ENST00000483407 HCRTR2O43614 444 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms