RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 DNAJC14Q6Y2X3 702 aaPredicted RBP16.66■□□□□ 0.26
SMIM4-204ENST00000482728 CCDC71Q8IV32 467 aaPredicted RBP16.66■□□□□ 0.26
SMIM4-204ENST00000482728 ROPN1LQ96C74 230 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 PIGQQ9BRB3 760 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 RABEP2Q9H5N1 569 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 STOML1Q9UBI4 398 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 MKLN1Q9UL63 735 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 DTNAQ9Y4J8 743 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 CACNA1CQ13936 2221 aa16.66■□□□□ 0.26
SMIM4-204ENST00000482728 A0A087WZY1 265 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 FCMRO60667 390 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 VIMP08670 466 aaKnown RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ZCCHC18P0CG32 403 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 TROVE2P10155 538 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 PEPDP12955 493 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ZFP36L2P47974 494 aaKnown RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ATP4BP51164 291 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ZNF41P51814 821 aaPredicted RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 B3GALT5-AS1P59052 145 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 HPCAP84074 193 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 SQLEQ14534 574 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ACSF3Q4G176 576 aaPredicted RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 GPAT3Q53EU6 434 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 AGKQ53H12 422 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 SP5Q6BEB4 398 aaPredicted RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 BLOC1S3Q6QNY0 202 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ARSKQ6UWY0 536 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 CHMP1BQ7LBR1 199 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 LACC1Q8IV20 430 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 LILRB4Q8NHJ6 448 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 B4GALNT2Q8NHY0 566 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 RFWD2Q8NHY2 731 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 PNPT1Q8TCS8 783 aaKnown RBP16.65■□□□□ 0.26
SMIM4-204ENST00000482728 ZPLD1Q8TCW7 415 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 STON2Q8WXE9 905 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 TRIB1Q96RU8 372 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 NMUR2Q9GZQ4 415 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 CHST11Q9NPF2 352 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 POLE3Q9NRF9 147 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 TMEM45AQ9NWC5 275 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 LIPT1Q9Y234 373 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 VDAC3Q9Y277 283 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 WDR45Q9Y484 360 aa16.65■□□□□ 0.26
SMIM4-204ENST00000482728 OR2M5A3KFT3 312 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 NPIPB9F8W1W9 429 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 HMGN4O00479 90 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 NR5A2O00482 541 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 NUDT14O95848 222 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 POU3F2P20265 443 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-204ENST00000482728 MAGEA8P43361 318 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 LHX2P50458 406 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 RNF144AP50876 292 aaPredicted RBP16.64■□□□□ 0.25
SMIM4-204ENST00000482728 GUCY1A3Q02108 690 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 CD226Q15762 336 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 RIPPLY2Q5TAB7 128 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 OR5M1Q8NGP8 315 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 ZFP90Q8TF47 636 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 SPDL1Q96EA4 605 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF350Q9GZX5 532 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 CALHM2Q9HA72 323 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 TPT1P8Q9HAU6 139 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 KCNJ16Q9NPI9 418 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 CARD8Q9Y2G2 431 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF337Q9Y3M9 751 aa16.64■□□□□ 0.25
SMIM4-204ENST00000482728 A0A0G2JNJ9 132 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 SERINC4A6NH21 518 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 CD8B2A6NJW9 211 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 HSPB2A8KAH6 182 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 IL2RAP01589 272 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 C1QCP02747 245 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 GUSBP08236 651 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 NR2F1P10589 423 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF708P17019 499 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 ADH7P40394 386 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 CRATP43155 626 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 EEFSECP57772 596 aaKnown RBP16.63■□□□□ 0.25
SMIM4-204ENST00000482728 CDSNQ15517 529 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF141Q15928 474 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 HSPB2Q16082 182 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMIM4-204ENST00000482728 PDZK1Q5T2W1 519 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 NSUN5P2Q63ZY6 315 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 SLC2A7Q6PXP3 512 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 OLIG3Q7RTU3 272 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 FUNDC1Q8IVP5 155 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 UBQLNLQ8IYU4 475 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 MEIOBQ8N635 442 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 GTF2H4Q92759 462 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 TRNT1Q96Q11 434 aaKnown RBP16.63■□□□□ 0.25
SMIM4-204ENST00000482728 TUBA1CQ9BQE3 449 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 SLC6A13Q9NSD5 602 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 Q9UFV3 132 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 PKDREJQ9NTG1 2253 aa16.63■□□□□ 0.25
SMIM4-204ENST00000482728 H3BML4 177 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF264O43296 627 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 UBL4AP11441 157 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 TIMP3P35625 211 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms