RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZBTB8AQ96BR9 441 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 SH3YL1Q96HL8 342 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-213ENST00000482192 MAELQ96JY0 434 aaKnown RBP10.73□□□□□ -0.69
HMGN1-213ENST00000482192 SLC35G5Q96KT7 338 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 ATP6V1G3Q96LB4 118 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 LURAP1Q96LR2 239 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 ZBTB18Q99592 522 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF559Q9BR84 538 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 SERHL2Q9H4I8 314 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 MCCC2Q9HCC0 563 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 ARGLU1Q9NWB6 273 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-213ENST00000482192 BTNL2Q9UIR0 455 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 VDAC3Q9Y277 283 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 L3MBTL1Q9Y468 752 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 GPR45Q9Y5Y3 372 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 KCNE3Q9Y6H6 103 aa10.73□□□□□ -0.69
HMGN1-213ENST00000482192 EEF1E1-BLOC1S5C9J1V9 151 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 NPIPB9F8W1W9 429 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 EEF1E1O43324 174 aaKnown RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 TNFRSF21O75509 655 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 CPSF4O95639 269 aaKnown RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 AGR2O95994 175 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 PGRP06401 933 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 AGFG1P52594 562 aaKnown RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 ATP12AP54707 1039 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 SUMO3P55854 103 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 CLDN20P56880 219 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 RPS3AP61247 264 aaKnown RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 UFM1P61960 85 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF117Q03924 483 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 LRRC74AQ0VAA2 488 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 FOXF2Q12947 444 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 PLPPR5Q32ZL2 321 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 NXNQ6DKJ4 435 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 OR2A2Q6IF42 318 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 C16orf62Q7Z3J2 963 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 P4HA3Q7Z4N8 544 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 GCNT2Q8N0V5 402 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 GTPBP8Q8N3Z3 284 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 TRIML2Q8N7C3 387 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 GLB1L3Q8NCI6 653 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 CHDHQ8NE62 594 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 PHOSPHO1Q8TCT1 267 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 MIPOL1Q8TD10 442 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 SMPDL3BQ92485 455 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF75CPQ92670 426 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 INTS12Q96CB8 462 aaKnown RBP10.72□□□□□ -0.69
HMGN1-213ENST00000482192 TEX37Q96LM6 180 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 CCDC115Q96NT0 180 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 PANX1Q96RD7 426 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 SDF2Q99470 211 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 NMUR2Q9GZQ4 415 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 OR51I1Q9H343 314 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 MED17Q9NVC6 651 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 EXD2Q9NVH0 621 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 JKAMPQ9P055 326 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF175Q9Y473 711 aa10.72□□□□□ -0.69
HMGN1-213ENST00000482192 NPIPA5A0A0B4J1W7 369 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 SHISA8B8ZZ34 492 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 NPIPA7E9PJI5 369 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 H0YC42 278 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 STX11O75558 287 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 TGM6O95932 706 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 CRHP06850 196 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 NPIPA8P0DM63 369 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 FCGR2AP12318 317 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 CAPN3P20807 821 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 PSMA4P25789 261 aaKnown RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 CHI3L1P36222 383 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 EIF1P41567 113 aaKnown RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 KIR2DL3P43628 341 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 KHKP50053 298 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 SUCLG1P53597 346 aaKnown RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 TPD52P55327 224 aaPredicted RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 CLDN15P56746 228 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 CACNA1CQ13936 2221 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 GSTA3Q16772 222 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 ARHGAP11BQ3KRB8 267 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 SLC9B1Q4ZJI4 515 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 PDCD4Q53EL6 469 aaKnown RBP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
HMGN1-213ENST00000482192 ATAD3BQ5T9A4 648 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 SAXO2Q658L1 398 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 HDXQ7Z353 690 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 MAVSQ7Z434 540 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 GGNQ86UU5 652 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 KIF18BQ86Y91 864 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 METTL25Q8N6Q8 603 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 ZNF614Q8N883 585 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 NEURL3Q96EH8 262 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 C7orf26Q96N11 449 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 OR52E6Q96RD3 313 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 SLC35A5Q9BS91 424 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 PINK1Q9BXM7 581 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 PIGMQ9H3S5 423 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 VIPAS39Q9H9C1 493 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 PACSIN3Q9UKS6 424 aa10.71□□□□□ -0.69
HMGN1-213ENST00000482192 ICAM5Q9UMF0 924 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms