RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	FLYWCH1	Q4VC44	716 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	LIN52	Q52LA3	116 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	AGK	Q53H12	422 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	EIPR1	Q53HC9	387 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	RNFT1	Q5M7Z0	435 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	C6orf10	Q5SRN2	563 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	FAM219B	Q5XKK7	198 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	TMEM211	Q6ICI0	200 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	REEP3	Q6NUK4	255 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	FAM180B	Q6P0A1	224 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	DHRS4L2	Q6PKH6	230 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	C6orf89	Q6UWU4	347 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	FRRS1	Q6ZNA5	592 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF621	Q6ZSS3	439 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	EIF3M	Q7L2H7	374 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	C16orf62	Q7Z3J2	963 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CPLX4	Q7Z7G2	160 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	DHDDS	Q86SQ9	333 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PATL1	Q86TB9	770 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CALHM3	Q86XJ0	350 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	RNF130	Q86XS8	419 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	KRT73	Q86Y46	540 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	SPPL2C	Q8IUH8	684 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	MSRB3	Q8IXL7	192 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PEX5L	Q8IYB4	626 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	FAM26E	Q8N5C1	309 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CISD2	Q8N5K1	135 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	LSMEM1	Q8N8F7	131 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	C11orf65	Q8NCR3	313 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR2M3	Q8NG83	312 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR4N2	Q8NGD1	307 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR4C3	Q8NH37	302 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC38A5	Q8WUX1	472 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	TMEM234	Q8WY98	164 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC9A6	Q92581	669 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CDS1	Q92903	461 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	VPS33A	Q96AX1	596 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	LRRC58	Q96CX6	371 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	C1GALT1C1	Q96EU7	318 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	RMND5B	Q96G75	393 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	REXO5	Q96IC2	774 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PPP1R36	Q96LQ0	422 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	RNF145	Q96MT1	663 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	LRRC37B	Q96QE4	947 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	NODAL	Q96S42	347 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	DMRTA2	Q96SC8	542 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	TREX2	Q9BQ50	279 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PIGQ	Q9BRB3	760 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	GPATCH1	Q9BRR8	931 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	TACO1	Q9BSH4	297 aa	Known RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	LAT2	Q9GZY6	243 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PCDHAC1	Q9H158	963 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR51I1	Q9H343	314 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	CALHM2	Q9HA72	323 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	EFCAB1	Q9HAE3	211 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC24A3	Q9HC58	644 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	GLRX2	Q9NS18	164 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	TUBA8	Q9NY65	449 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	VAPA	Q9P0L0	249 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	PPP4R1L	Q9P1A2	415 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF175	Q9Y473	711 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	WDR45	Q9Y484	360 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	AP4B1	Q9Y6B7	739 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	HCFC1	P51610	2035 aa		4.63	□□□□□ -1.67
HDAC6-223	ENST00000480525	ASH1L	Q9NR48	2969 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	TRGV5	A0A0B4J1U4	118 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GXYLT2	A0PJZ3	443 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MBD3L3	A6NE82	208 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GJE1	A6NN92	205 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FAM220BP	B1ANY3	271 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	NR5A2	O00482	541 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FBP2	O00757	339 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ADAMDEC1	O15204	470 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF208	O43345	1280 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZIC3	O60481	467 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	UNC5C	O95185	931 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PGM3	O95394	542 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	H6PD	O95479	791 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	EPPIN	O95925	133 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	IL18BP	O95998	194 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	IFNA14	P01570	189 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	UBL4A	P11441	157 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	FCGR2A	P12318	317 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PGC	P20142	388 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC6A2	P23975	617 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MST1	P26927	711 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	GDF1	P27539	372 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PCGF2	P35227	344 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	PTGS2	P35354	604 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	SOAT1	P35610	550 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	APOBEC1	P41238	236 aa	Known RBP	4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MAGEA5	P43359	124 aa		4.62	□□□□□ -1.67
HDAC6-223	ENST00000480525	MASP1	P48740	699 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms