RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MAPK14Q16539 360 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 OR5M10Q6IEU7 315 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 TRILQ7L0X0 811 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 ARPINQ7Z6K5 226 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 BBS10Q8TAM1 723 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 PHOSPHO1Q8TCT1 267 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 MAL2Q969L2 176 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 GPATCH1Q9BRR8 931 aaKnown RBP17.96■□□□□ 0.47
LIME1-205ENST00000480139 NBASA2RRP1 2371 aa17.96■□□□□ 0.47
LIME1-205ENST00000480139 SVILO95425 2214 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 CENPVL1A0A0U1RR11 272 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 AIM2O14862 343 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 DBIP07108 87 aaKnown RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 SLC6A2P23975 617 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 SUMO3P55854 103 aaPredicted RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 CDK6Q00534 326 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 RBPJQ06330 500 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 ELOAQ14241 798 aaKnown RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.95■□□□□ 0.46
LIME1-205ENST00000480139 C8orf82Q6P1X6 216 aaPredicted RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 CHERPQ8IWX8 916 aaKnown RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 CMIPQ8IY22 773 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 FITM2Q8N6M3 262 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 ZNF614Q8N883 585 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 GATSQ8NAP1 163 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 NEIL3Q8TAT5 605 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 ZG16BQ96DA0 208 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 HOPXQ9BPY8 73 aaPredicted RBP17.95■□□□□ 0.46
LIME1-205ENST00000480139 TRIM8Q9BZR9 551 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 DSN1Q9H410 356 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 MED11Q9P086 117 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 SLC35A3Q9Y2D2 325 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 AP3M1Q9Y2T2 418 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 L3MBTL1Q9Y468 752 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 LIPGQ9Y5X9 500 aa17.95■□□□□ 0.46
LIME1-205ENST00000480139 TRGV5A0A0B4J1U4 118 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 OR14I1A6ND48 311 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 C5orf58C9J3I9 102 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 J3QKU1 62 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 AQP7O14520 342 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 ZNF264O43296 627 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 CDC40O60508 579 aaKnown RBP eCLIP17.94■□□□□ 0.462e-6■□□□□ 8.5
LIME1-205ENST00000480139 EIF4E2O60573 245 aaKnown RBP17.94■□□□□ 0.46
LIME1-205ENST00000480139 TRAPPC6AO75865 159 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 UBL4AP11441 157 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 DPP4P27487 766 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 NUDT2P50583 147 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 ZNF117Q03924 483 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 KRT72Q14CN4 511 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 CYP51A1Q16850 503 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 RABL3Q5HYI8 236 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 NHSL2Q5HYW2 709 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 REEP3Q6NUK4 255 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 EIF3MQ7L2H7 374 aaKnown RBP17.94■□□□□ 0.46
LIME1-205ENST00000480139 PTOV1Q86YD1 416 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 SLC30A8Q8IWU4 369 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 PEX5LQ8IYB4 626 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 C11orf65Q8NCR3 313 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 FAM71CQ8NEG0 241 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 FAM83FQ8NEG4 500 aaPredicted RBP17.94■□□□□ 0.46
LIME1-205ENST00000480139 TOR1AIP2Q8NFQ8 470 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 B4GALNT2Q8NHY0 566 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 C1GALT1C1Q96EU7 318 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.94■□□□□ 0.46
LIME1-205ENST00000480139 TAGLN3Q9UI15 199 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 ICAM5Q9UMF0 924 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 ZNF835Q9Y2P0 537 aa17.94■□□□□ 0.46
LIME1-205ENST00000480139 RP1L1Q8IWN7 2480 aaPredicted RBP17.94■□□□□ 0.46
LIME1-205ENST00000480139 FREM3P0C091 2139 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 ZNF407Q9C0G0 2248 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 A0A087WZY1 265 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 A0A1B0GTH9 108 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 GTPBP1O00178 669 aaKnown RBP17.93■□□□□ 0.46
LIME1-205ENST00000480139 HCRTR2O43614 444 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 PDE9AO76083 593 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 PGM3O95394 542 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 THBS1P07996 1170 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 NID1P14543 1247 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 ETS2P15036 469 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 GZMMP51124 257 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 P2RX1P51575 399 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 HSF1Q00613 529 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 MRPL49Q13405 166 aaKnown RBP17.93■□□□□ 0.46
LIME1-205ENST00000480139 ART3Q13508 389 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 SCARB2Q14108 478 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 TOMM20Q15388 145 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 ZSWIM7Q19AV6 140 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 GLYR1Q49A26 553 aaPredicted RBP17.93■□□□□ 0.46
LIME1-205ENST00000480139 Q6ZPB1 254 aaPredicted RBP17.93■□□□□ 0.46
LIME1-205ENST00000480139 FGD2Q7Z6J4 655 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 CALHM3Q86XJ0 350 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 HIPK4Q8NE63 616 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 OR10A6Q8NH74 314 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 NFKBIDQ8NI38 313 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 WDR60Q8WVS4 1066 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 LAT2Q9GZY6 243 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 QRSL1Q9H0R6 528 aaKnown RBP17.93■□□□□ 0.46
LIME1-205ENST00000480139 SLC6A15Q9H2J7 730 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 LDAHQ9H6V9 325 aa17.93■□□□□ 0.46
LIME1-205ENST00000480139 EXOSC3Q9NQT5 275 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms