RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FBXL2Q9UKC9 423 aa24.37■■□□□ 1.49
CCM2-211ENST00000478582 SPTAN1Q13813 2472 aaKnown RBP24.37■■□□□ 1.49
CCM2-211ENST00000478582 TMEM247A6NEH6 219 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 CYSRT1A8MQ03 144 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 C17orf51A8MQB3 221 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 NUDT7P0C024 238 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 MSX1P28360 303 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 SRD5A2P31213 254 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 ADH7P40394 386 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 CRISP3P54108 245 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 PER3P56645 1201 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 CD226Q15762 336 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 PDZK1Q5T2W1 519 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 PRAMEF8Q5VWM4 474 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 PRAMEF7Q5VXH5 474 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 NANOGP8Q6NSW7 305 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 OR4K17Q8NGC6 315 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 RELTQ969Z4 430 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 CMTM5Q96DZ9 223 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 LRRC37BQ96QE4 947 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 THUMPD3Q9BV44 507 aaKnown RBP24.36■■□□□ 1.49
CCM2-211ENST00000478582 OR2B2Q9GZK3 357 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 TMEM38AQ9H6F2 299 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 NANOGQ9H9S0 305 aa24.36■■□□□ 1.49
CCM2-211ENST00000478582 SUCOQ9UBS9 1254 aaKnown RBP24.36■■□□□ 1.49
CCM2-211ENST00000478582 H3BNH8 94 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 CDC40O60508 579 aaKnown RBP eCLIP24.35■■□□□ 1.49
CCM2-211ENST00000478582 RBPJQ06330 500 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 CAPRIN1Q14444 709 aaKnown RBP24.35■■□□□ 1.49
CCM2-211ENST00000478582 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.35■■□□□ 1.49
CCM2-211ENST00000478582 GCNT6Q5T4J0 391 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 FAM91A1Q658Y4 838 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 ARHGAP11AQ6P4F7 1023 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 RCN3Q96D15 328 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 ZG16BQ96DA0 208 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 SH3GL1Q99961 368 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 KAT8Q9H7Z6 458 aaKnown RBP24.35■■□□□ 1.49
CCM2-211ENST00000478582 PTGES2Q9H7Z7 377 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 MED11Q9P086 117 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 ZNF835Q9Y2P0 537 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 LIPGQ9Y5X9 500 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 DSPPQ9NZW4 1301 aa24.35■■□□□ 1.49
CCM2-211ENST00000478582 MAST4O15021 2626 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 TRGV5A0A0B4J1U4 118 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 A0A1B0GTH9 108 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 SERINC4A6NH21 518 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 TRAPPC6AO75865 159 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 PDE9AO76083 593 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 BCHEP06276 602 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 ARAFP10398 606 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 DSCR4P56555 118 aaPredicted RBP24.34■■□□□ 1.49
CCM2-211ENST00000478582 MTPNP58546 118 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 HSF1Q00613 529 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 SELPLGQ14242 412 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 MAPK14Q16539 360 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 ZNF630Q2M218 657 aaPredicted RBP24.34■■□□□ 1.49
CCM2-211ENST00000478582 C1QL3Q5VWW1 255 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 FGD2Q7Z6J4 655 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 GATSQ8NAP1 163 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 CCDC197Q8NCU1 140 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 FAM83FQ8NEG4 500 aaPredicted RBP24.34■■□□□ 1.49
CCM2-211ENST00000478582 OR8J3Q8NGG0 315 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 NEIL3Q8TAT5 605 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 PHOSPHO1Q8TCT1 267 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 TMEM19Q96HH6 336 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 BCL2L10Q9HD36 194 aa24.34■■□□□ 1.49
CCM2-211ENST00000478582 DIDO1Q9BTC0 2240 aaKnown RBP24.34■■□□□ 1.49
CCM2-211ENST00000478582 A0A0G2JPF8 293 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 CENPVL1A0A0U1RR11 272 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 AGAP5A6NIR3 686 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 HNRNPCL2B2RXH8 293 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 HNRNPCL3B7ZW38 293 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 AQP7O14520 342 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 HNRNPCL1O60812 293 aaKnown RBP24.33■■□□□ 1.49
CCM2-211ENST00000478582 HNRNPCL4P0DMR1 293 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 RPS4Y1P22090 263 aaKnown RBP24.33■■□□□ 1.49
CCM2-211ENST00000478582 FGFBP1Q14512 234 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 GANABQ14697 944 aaKnown RBP24.33■■□□□ 1.49
CCM2-211ENST00000478582 ADRM1Q16186 407 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 FJX1Q86VR8 437 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 SPPL2CQ8IUH8 684 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 MAL2Q969L2 176 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 TREX2Q9BQ50 279 aaPredicted RBP24.33■■□□□ 1.49
CCM2-211ENST00000478582 SLC39A3Q9BRY0 314 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 LDAHQ9H6V9 325 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 EFCAB1Q9HAE3 211 aa24.33■■□□□ 1.49
CCM2-211ENST00000478582 NCKAP5O14513 1909 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 A1L4Q6 167 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 OR14I1A6ND48 311 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 EIF4E2O60573 245 aaKnown RBP24.32■■□□□ 1.48
CCM2-211ENST00000478582 DPP4P27487 766 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 TOMM20Q15388 145 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 Q6ZPB1 254 aaPredicted RBP24.32■■□□□ 1.48
CCM2-211ENST00000478582 NET1Q7Z628 596 aaPredicted RBP24.32■■□□□ 1.48
CCM2-211ENST00000478582 ZNF614Q8N883 585 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 B4GALNT2Q8NHY0 566 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 C1GALT1C1Q96EU7 318 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 TRIM8Q9BZR9 551 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 SLC6A15Q9H2J7 730 aa24.32■■□□□ 1.48
CCM2-211ENST00000478582 DOPEY1Q5JWR5 2465 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms