RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SLC52A3Q9NQ40 469 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SAR1AQ9NR31 198 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SLC25A37Q9NYZ2 338 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 VAPAQ9P0L0 249 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 P2RX2Q9UBL9 471 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF835Q9Y2P0 537 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NDUFAF1Q9Y375 327 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CAPN7Q9Y6W3 813 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NCOA6Q14686 2063 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 DOCK7Q96N67 2140 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 A0A1B0GUH1 482 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 A0A1B0GVC2 190 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 PRAMEF27A3QJZ7 478 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 GMNCA6NCL1 334 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 OR14I1A6ND48 311 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM247A6NEH6 219 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 H3BNH8 94 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 GTPBP1O00178 669 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CYP7B1O75881 506 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CHRM4P08173 479 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RNF224P0DH78 156 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 HOXB9P17482 250 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 HK1P19367 917 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 DRD4P21917 467 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SRD5A2P31213 254 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 GCKP35557 465 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MVDP53602 400 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ATP12AP54707 1039 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 DSCR4P56555 118 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF117Q03924 483 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CHRNEQ04844 493 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 KLF10Q13118 480 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 NFYCQ13952 458 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 GANABQ14697 944 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RGNQ15493 299 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MMEL1Q495T6 779 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RPS26P11Q5JNZ5 115 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 LRIF1Q5T3J3 769 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 WLSQ5T9L3 541 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TYW3Q6IPR3 259 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ARSKQ6UWY0 536 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 Q6ZPB1 254 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RETREG3Q86VR2 466 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SNX32Q86XE0 403 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 DOLPP1Q86YN1 238 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 POU5F2Q8N7G0 328 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 FADS6Q8N9I5 356 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ABTB1Q969K4 478 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MAL2Q969L2 176 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ARSGQ96EG1 525 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 OR2B2Q9GZK3 357 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 HOXD1Q9GZZ0 328 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RAD21L1Q9H4I0 556 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 IKZF5Q9H5V7 419 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RUBCNLQ9H714 662 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM45AQ9NWC5 275 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SUCOQ9UBS9 1254 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CAMK2AQ9UQM7 478 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CARD8Q9Y2G2 431 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 DTNAQ9Y4J8 743 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 INTS1Q8N201 2190 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 LOC100653049A0A140TA62 436 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 A0A1W2PQD3 144 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 FIGNL2A6NMB9 653 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 FAM47E-STBD1D6RA91 191 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 NPIPB9F8W1W9 429 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 BCKDKO14874 412 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 OIP5O43482 229 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ZG16O60844 167 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 UGT2B17O75795 530 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MPDZO75970 2070 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 KRT34O76011 436 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 NUDT7P0C024 238 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 UBTFL6P0CB48 400 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 UBL4AP11441 157 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 BMP7P18075 431 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF41P51814 821 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 PER3P56645 1201 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MTPNP58546 118 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 TXNL4AP83876 142 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 SRYQ05066 204 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CRYZQ08257 329 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 FADDQ13158 208 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CAPRIN1Q14444 709 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MAPRE2Q15555 327 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MAPK14Q16539 360 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF630Q2M218 657 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 GXYLT1Q4G148 440 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 KLHL26Q53HC5 615 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 EMC4Q5J8M3 183 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 REP15Q6BDI9 236 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 CBLN3Q6UW01 205 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MTDHQ86UE4 582 aaKnown RBP6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MED12LQ86YW9 2145 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 MISPQ8IVT2 679 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF619Q8N2I2 560 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 RPRMLQ8N4K4 120 aa6.26□□□□□ -1.41
BRCA1-215ENST00000478531 B4GALNT2Q8NHY0 566 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms