RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 NLRC5Q86WI3 1866 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 A0A0A6YYC8 382 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 TRAV40A0A0B4J280 105 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 I3L1I5 382 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 WDR46O15213 610 aaKnown RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 ZNF780AO75290 641 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 KIAA0754O94854 1291 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 CTDNEP1O95476 244 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 PNPP00491 289 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 HIST1H2AGP0C0S8 130 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 CRISP2P16562 243 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 COX7A1P24310 79 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 IL9RQ01113 521 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 ATXN7L3Q14CW9 347 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 TOMM20Q15388 145 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 PRSS8Q16651 343 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 ZNF789Q5FWF6 425 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 ZNF311Q5JNZ3 666 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 CCDC158Q5M9N0 1113 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 DNLZQ5SXM8 178 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 FAM120AOSQ5T036 256 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 HIST2H2AA3Q6FI13 130 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 WDR74Q6RFH5 385 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 PET117Q6UWS5 81 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 ARMCX2Q7L311 632 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 CENPSQ8N2Z9 138 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 BPIFB2Q8N4F0 458 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 HIST1H2ACQ93077 130 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 TEKT1Q969V4 418 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 RAB7BQ96AH8 199 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 NRIP2Q9BQI9 281 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 FEM1AQ9BSK4 669 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 POLR2J2Q9GZM3 115 aaKnown RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 POLR2J3Q9H1A7 115 aaKnown RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 DUS2Q9NX74 493 aaKnown RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 NFKBIL1Q9UBC1 381 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 BTNL2Q9UIR0 455 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 FOXA2Q9Y261 457 aaPredicted RBP1.1□□□□□ -2.23
HPS3-205ENST00000478525 USP16Q9Y5T5 823 aa1.1□□□□□ -2.23
HPS3-205ENST00000478525 GFYI3L273 518 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 LAD1O00515 517 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 RCBTB2O95199 551 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 SLC4A1P02730 911 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 IFNAR1P17181 557 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 ST8SIA6P61647 398 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 CSNK1G2P78368 415 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 PSG5Q15238 335 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 SLX4IPQ5VYV7 408 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 STAC2Q6ZMT1 411 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 NEGR1Q7Z3B1 354 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 GLRX5Q86SX6 157 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 OR52P1PQ8NH57 321 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 SMARCD2Q92925 531 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 DEFB118Q96PH6 123 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 MAF1Q9H063 256 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 RBM28Q9NW13 759 aaKnown RBP1.09□□□□□ -2.23
HPS3-205ENST00000478525 RIMS3Q9UJD0 308 aa1.09□□□□□ -2.23
HPS3-205ENST00000478525 PLA2R1Q13018 1463 aa1.09□□□□□ -2.24
HPS3-205ENST00000478525 MROH7-TTC4A0A0A0MT08 1334 aa1.09□□□□□ -2.24
HPS3-205ENST00000478525 PCNX2A6NKB5 2137 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 PPIHO43447 177 aaKnown RBP1.08□□□□□ -2.24
HPS3-205ENST00000478525 BUB1O43683 1085 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 SNAPINO95295 136 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 CISD3P0C7P0 127 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 TSPY4P0CV99 314 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 TSPY10P0CW01 314 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 KARSQ15046 597 aaKnown RBP1.08□□□□□ -2.24
HPS3-205ENST00000478525 ANKRD20A8PQ5CZ79 823 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 PRAMEF8Q5VWM4 474 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 SHQ1Q6PI26 577 aaKnown RBP1.08□□□□□ -2.24
HPS3-205ENST00000478525 HOOK3Q86VS8 718 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 IFNEQ86WN2 208 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 VRK2Q86Y07 508 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 CCDC36Q8IYA8 594 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 ATP6V0A1Q93050 837 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 UTP14AQ9BVJ6 771 aaKnown RBP1.08□□□□□ -2.24
HPS3-205ENST00000478525 GPR61Q9BZJ8 451 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 TSPYL1Q9H0U9 437 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 GGA2Q9UJY4 613 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 TTLL3Q9Y4R7 772 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 FKBP7Q9Y680 259 aa1.08□□□□□ -2.24
HPS3-205ENST00000478525 ZNF705EA8MWA4 302 aaPredicted RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 SLC28A1O00337 649 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 B4GALT5O43286 388 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 STK17BO94768 372 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 APRTP07741 180 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 SERPINH1P50454 418 aaKnown RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 NLRP11P59045 1033 aaKnown RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 RPL8P62917 257 aaKnown RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 SRSF5Q13243 272 aaKnown RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 CYBRD1Q53TN4 286 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 BEND6Q5SZJ8 279 aaPredicted RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 ZNF880Q6PDB4 577 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 C6orf120Q7Z4R8 191 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 PNKDQ8N490 385 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 RBMXL1Q96E39 390 aaKnown RBP1.07□□□□□ -2.24
HPS3-205ENST00000478525 CCDC114Q96M63 670 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 NPAS2Q99743 824 aa1.07□□□□□ -2.24
HPS3-205ENST00000478525 SLC25A22Q9H936 323 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms