RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 NUCB2P80303 420 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 TRDNQ13061 729 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 KLF5Q13887 457 aaPredicted RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ABRAXAS2Q15018 415 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 EXOSC7Q15024 291 aaKnown RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 GPAT3Q53EU6 434 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 LIPKQ5VXJ0 399 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 CARD17Q5XLA6 110 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 PYHIN1Q6K0P9 492 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 RHBDD2Q6NTF9 364 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 STEAP1BQ6NZ63 245 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NIPAL3Q6P499 406 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC39A4Q6P5W5 647 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 LRRC8BQ6P9F7 803 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 VITQ6UXI7 678 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SYT10Q6XYQ8 523 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ASRGL1Q7L266 308 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 CENPQQ7L2Z9 268 aaPredicted RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 GPR142Q7Z601 462 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 LRRC75A-AS1Q8N1F1 130 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 GPD1LQ8N335 351 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 OR9K2Q8NGE7 335 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 OR6T1Q8NGN1 323 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC2A14Q8TDB8 520 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 PHYHIPQ92561 330 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ITFG2Q969R8 447 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ISG20Q96AZ6 181 aaKnown RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NTNG2Q96CW9 530 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 RAB39BQ96DA2 213 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NRBF2Q96F24 287 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 CAPNS2Q96L46 248 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 IFT74Q96LB3 600 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ATP6V1G3Q96LB4 118 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 CASD1Q96PB1 797 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 TESK2Q96S53 571 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NPAS2Q99743 824 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 C11orf70Q9BRQ4 267 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 TMEM43Q9BTV4 400 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NUP58Q9BVL2 599 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 MRPL37Q9BZE1 423 aaKnown RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 DCTPP1Q9H773 170 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 MEAF6Q9HAF1 191 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ZFP14Q9HCL3 533 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 AMBNQ9NP70 447 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ARMCX1Q9P291 453 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 TP53TG3Q9ULZ0 132 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 STK38LQ9Y2H1 464 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC6A5Q9Y345 797 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 V9GYY5 206 aaPredicted RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 IGLV3-10A0A075B6K4 115 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 FAM240BA0A1B0GVZ2 78 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BTBD17A6NE02 478 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 K7ERI5 159 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 PHOX2AO14813 284 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ARPC3O15145 178 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 CETN3O15182 167 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 AKR7A2O43488 359 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BCAS1O75363 584 aaPredicted RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 NEBLO76041 1014 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 PIGRP01833 764 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 IVLP07476 585 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 UBTFL6P0CB48 400 aaPredicted RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF44P15621 663 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 UQCRC2P22695 453 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RDXP35241 583 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 TRIM23P36406 574 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 EPS15P42566 896 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 SYKP43405 635 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC6A8P48029 635 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 NUMBP49757 651 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 PPT1P50897 306 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC7A2P52569 658 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 NDST1P52848 882 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RPS4XP62701 263 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 DNAJC3Q13217 504 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 RUNX3Q13761 415 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 IL18Q14116 193 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 HAGHQ16775 308 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 C17orf58Q2M2W7 97 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 C14orf28Q4W4Y0 310 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 C10orf120Q5SQS8 335 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 LRRC66Q68CR7 880 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ATL3Q6DD88 541 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 HIST2H2AA3Q6FI13 130 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZSCAN25Q6NSZ9 544 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BLOC1S2Q6QNY1 142 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BAIAP2L2Q6UXY1 529 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 YRDCQ86U90 279 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 UBE2J2Q8N2K1 259 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF491Q8N8L2 437 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ANKFN1Q8N957 763 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 NECAB1Q8N987 351 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF397Q8NF99 534 aaPredicted RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 BPIFCQ8NFQ6 507 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 PNPT1Q8TCS8 783 aaKnown RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 TBCKQ8TEA7 893 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF707Q96C28 371 aaPredicted RBP3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 LRRC39Q96DD0 335 aa3.01□□□□□ -1.93
SMARCA1-204ENST00000478420 C12orf66Q96MD2 445 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms