RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 NMUR2Q9GZQ4 415 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 WWP1Q9H0M0 922 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 SIRPDQ9H106 197 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 SLCO5A1Q9H2Y9 848 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 RNF41Q9H4P4 317 aaPredicted RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 TMEM231Q9H6L2 316 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 EGLN3Q9H6Z9 239 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 MTHFD2LQ9H903 347 aaPredicted RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 ACTR5Q9H9F9 607 aaPredicted RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 HRASLSQ9HDD0 168 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 MYOZ2Q9NPC6 264 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 MYNNQ9NPC7 610 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 SERTAD4Q9NUC0 356 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 PIGVQ9NUD9 493 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 LIN7CQ9NUP9 197 aaKnown RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 TREM2Q9NZC2 230 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 ABI3Q9P2A4 366 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 DNMT3BQ9UBC3 853 aaKnown RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 ARPP21Q9UBL0 812 aaPredicted RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 HSPB7Q9UBY9 170 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 OR52A1Q9UKL2 312 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 PIGLQ9Y2B2 252 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 PRG3Q9Y2Y8 225 aaPredicted RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 L3MBTL1Q9Y468 752 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 ASB4Q9Y574 426 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 URGCP-MRPS24S4R325 110 aa3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 COL14A1Q05707 1796 aaKnown RBP3.25□□□□□ -1.89
FNDC3B-209ENST00000478016 RGPD1P0DJD0 1748 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 UMODL1Q5DID0 1318 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 QRICH2Q9H0J4 1663 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 THSD7AQ9UPZ6 1657 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 LRP5O75197 1615 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 TBC1D3KA0A087X1G2 549 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 A0A1B0GW15 77 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 GXYLT2A0PJZ3 443 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ILVBLA1L0T0 632 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 C9orf170A2RU37 121 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 AQP7P3A6NL99 342 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 DUXAA6NLW8 204 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ZNF99A8MXY4 864 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 H3BN98 237 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 J3KTA2 159 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 WWP2O00308 870 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 RAB29O14966 203 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 CHP2O43745 196 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 PRAMEF2O60811 474 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SHOX2O60902 331 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 OR4F21O95013 312 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ANGPTL1O95841 491 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ADAP00813 363 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 RPN2P04844 631 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 IFNA4P05014 189 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SERPIND1P05546 499 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 LCKP06239 509 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 UBCP0CG48 685 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SCGB1A1P11684 91 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 COX4I1P13073 169 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 DPEP1P16444 411 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ZNF18P17022 549 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 GOT1P17174 413 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 AMD1P17707 334 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 WT1P19544 449 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 FBLP22087 321 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ADORA2AP29274 412 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 PRDX6P30041 224 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SLC6A1P30531 599 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SLC6A6P31641 620 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SHMT2P34897 504 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 THBS4P35443 961 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 CYLC1P35663 651 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 AHRP35869 848 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 CEACAM3P40198 252 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 NSFP46459 744 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SLCO1A2P46721 670 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 BRCC3P46736 316 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 YAP1P46937 504 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 NPBWR2P48146 333 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 RGS6P49758 472 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 STK19P49842 368 aaPredicted RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SUOXP51687 545 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 MVDP53602 400 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ARSFP54793 590 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 UCNP55089 124 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 LSM6P62312 80 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ERVK-25P63136 954 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 MRPS11P82912 194 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 TFAMQ00059 246 aaKnown RBP3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 GALK2Q01415 458 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 MYL7Q01449 175 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SEMG2Q02383 582 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 SP3Q02447 781 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 HYAL1Q12794 435 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ILKQ13418 452 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 ITGA9Q13797 1035 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 TFDP1Q14186 410 aa3.24□□□□□ -1.89
FNDC3B-209ENST00000478016 POU6F1Q14863 301 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms