RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CELF2-AS1Q8N7Q2 184 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SMAP2Q8WU79 429 aaPredicted RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 NSMAFQ92636 917 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 IER2Q9BTL4 223 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 COMMD4Q9H0A8 199 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF226Q9NYT6 803 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 PCDHGB7Q9Y5F8 929 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SLC22A31A6NKX4 558 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 AGAP14A8MT82 685 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 HPGDSO60760 199 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF823P16415 610 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 OPRD1P41143 372 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 EP300Q09472 2414 aaPredicted RBP10.31□□□□□ -0.76
COL27A1-204ENST00000477421 UBE2UQ5VVX9 321 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 LACC1Q8IV20 430 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 SERPINA12Q8IW75 414 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 ADOQ96SZ5 270 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM246Q9BRR3 403 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 CD207Q9UJ71 328 aa10.31□□□□□ -0.76
COL27A1-204ENST00000477421 LOC105369274A0A096LPK9 316 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 LOC102723532A0A0G2JNH3 316 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 PEX12O00623 359 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SLC2A10O95528 541 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 GPR75O95800 540 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 TRIM23P36406 574 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 DUSP5Q16690 384 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CDH24Q86UP0 819 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 OR4N4Q8N0Y3 316 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 LINC01555Q8NAE3 123 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 NLGN4YQ8NFZ3 816 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SGTBQ96EQ0 304 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 GPER1Q99527 375 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CKLFQ9UBR5 152 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF443Q9Y2A4 671 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 MRPS17Q9Y2R5 130 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 AK6Q9Y3D8 172 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 RNF13O43567 381 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CSO75390 466 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 PROS1P07225 676 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CISD3P0C7P0 127 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 FUT1P19526 365 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 APEX1P27695 318 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 DNASE1L1P49184 302 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ERVK-25P63136 954 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ELOCQ15369 112 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 PGGHGQ32M88 737 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM196Q5HYL7 178 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 AGBL4Q5VU57 503 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 MCATQ8IVS2 390 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SCAIQ8N9R8 606 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM163Q8TC26 289 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF582Q96NG8 517 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 S100A13Q99584 98 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 B3GNT4Q9C0J1 378 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SEMA4GQ9NTN9 838 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ICKQ9UPZ9 632 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 A0A1W2PS29 197 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 MOSPD3O75425 235 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CEACAM5P06731 702 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 CCKBRP32239 447 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 AP2S1P53680 142 aaPredicted RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 FAHD1Q6P587 224 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SLC29A4Q7RTT9 530 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ALDH16A1Q8IZ83 802 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF619Q8N2I2 560 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 JAGN1Q8N5M9 183 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 BCL7BQ9BQE9 202 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 GINS4Q9BRT9 223 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 TAPBPLQ9BX59 468 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
COL27A1-204ENST00000477421 SLC6A14Q9UN76 642 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 PCDHGB1Q9Y5G3 927 aa10.3□□□□□ -0.76
COL27A1-204ENST00000477421 RTTNQ86VV8 2226 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TVP23AA6NH52 213 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 OR5K4A6NMS3 321 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 OPN1LWP04000 364 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SPARCP09486 303 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 TSPAN31Q12999 210 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SYT14P1Q58G82 188 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 PHF19Q5T6S3 580 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 RPTNQ6XPR3 784 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 HDDC2Q7Z4H3 204 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 GKN2Q86XP6 184 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 CADM3Q8N126 398 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SLC37A2Q8TED4 501 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 A4GALTQ9NPC4 353 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 CDH10Q9Y6N8 788 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SVILO95425 2214 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 GPX5O75715 221 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 SERPINA3P01011 423 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 CD2P06729 351 aa10.29□□□□□ -0.76
COL27A1-204ENST00000477421 HTR1AP08908 422 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms