RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ENO1P06733 434 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 FESP07332 822 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 RPS17P08708 135 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 FAHP16930 419 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 HK1P19367 917 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 NTSP30990 170 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 LHX2P50458 406 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 NR1H2P55055 460 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 WNT3P56703 355 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 TRAF3Q13114 568 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ACKR1Q16570 336 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 TEX35Q5T0J7 233 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 RAET1LQ5VY80 246 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ADGRE4PQ86SQ3 457 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 MMP21Q8N119 569 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 C1orf52Q8N6N3 182 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 WDSUB1Q8N9V3 476 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 METTL6Q8TCB7 284 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF483Q8TF39 744 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SLC44A1Q8WWI5 657 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 GALNT9Q9HCQ5 603 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 Q9N2J8 555 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 MIEF1Q9NQG6 463 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 GLRX2Q9NS18 164 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF180Q9UJW8 692 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SNX8Q9Y5X2 465 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 AP4B1Q9Y6B7 739 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 A0A087WUV0 522 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 LRRC14BA6NHZ5 514 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CTIFO43310 598 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PLOD3O60568 738 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 TSPAN2O60636 221 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CRCPO75575 148 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SUPT7LO94864 414 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PLGP00747 810 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SNRPAP09012 282 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CRYGSP22914 178 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 EMDP50402 254 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PKNOX1P55347 436 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CTBP2P56545 445 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 MRPS25P82663 173 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 C17orf67Q0P5P2 114 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 MGAT2Q10469 447 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF155Q12901 538 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PIN1Q13526 163 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 IMPG1Q17R60 797 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 VPS26BQ4G0F5 336 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 TRMT12Q53H54 448 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF628Q5EBL2 1059 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CT83Q5H943 113 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 Q5PR19 223 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 DCST1Q5T197 706 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 GPRIN3Q6ZVF9 776 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CBLL1Q75N03 491 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SLC44A2Q8IWA5 706 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 GCNT2Q8N0V5 402 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 HIPK4Q8NE63 616 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 MNS1Q8NEH6 495 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 EXOSC8Q96B26 276 aaKnown RBP6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PIK3IP1Q96FE7 263 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 GPR78Q96P69 363 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 FUT8Q9BYC5 575 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 CXorf56Q9H5V9 222 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 UBTD1Q9HAC8 227 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 FOLH1BQ9HBA9 442 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 NGBQ9NPG2 151 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SLC35C2Q9NQQ7 365 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 SETD2Q9BYW2 2564 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 MED12LQ86YW9 2145 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 A0A087WV62 115 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 POC1B-GALNT4F8VUJ3 575 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 MANBAO00462 879 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 SYNGR4O95473 234 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 IFI6P09912 130 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 PABPC4LP0CB38 370 aaKnown RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 TBXA2RP21731 343 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 SDHAP31040 664 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 EVI2BP34910 448 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 PTGDSP41222 190 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 SLCO1A2P46721 670 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CLDN18P56856 261 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 GALNT1Q10472 559 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 DBPQ10586 325 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 FOXF2Q12947 444 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CR1LQ2VPA4 569 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 TEPPQ6URK8 271 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 PLEKHM3Q6ZWE6 761 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 EXOC3L1Q86VI1 746 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 ZFP28Q8NHY6 868 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 FAM76AQ8TAV0 307 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 TMEM171Q8WVE6 324 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CNRIP1Q96F85 164 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 REXO5Q96IC2 774 aaKnown RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF382Q96SR6 550 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 PAFAH2Q99487 392 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 FMO2Q99518 471 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms