RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 LIPNQ5VXI9 398 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 TMEM107Q6UX40 140 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 OR2L13Q8N349 312 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 POC1BQ8TC44 478 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 KLHL15Q96M94 604 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 KLHDC3Q9BQ90 382 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 LMF2Q9BU23 707 aaKnown RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 SRXN1Q9BYN0 137 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PLA2G12AQ9BZM1 189 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 CBLN4Q9NTU7 201 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 NPAP1Q9NZP6 1156 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 KCNS2Q9ULS6 477 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 GNG14A0A1W2PPG7 69 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 GXYLT2A0PJZ3 443 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 ALG1L2C9J202 215 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 NDUFB5O43674 189 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 LYZL6O75951 148 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 SLITRK5O94991 958 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 JUNP05412 331 aaKnown RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 YES1P07947 543 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 RPS17P08708 135 aaKnown RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 COL6A2P12110 1019 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 HSD3B1P14060 373 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 TSPAN8P19075 237 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 ME2P23368 584 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 HSD3B2P26439 372 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 SHC1P29353 583 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 GABRA3P34903 492 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 GZMKP49863 264 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 NCBP2P52298 156 aaKnown RBP eCLIP10.05□□□□□ -0.85e-10■■■■■ 33.9
BRCA1-213ENST00000476777 CDH13P55290 713 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 HEPACAMQ14CZ8 416 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 STK11Q15831 433 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 TCHHL1Q5QJ38 904 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 UBAP2Q5T6F2 1119 aaKnown RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 FAM166AQ6J272 317 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 Q6ZSR9 355 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 Q6ZT83 130 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 LILRA2Q8N149 483 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 MUC15Q8N387 334 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 ACTRT2Q8TDY3 377 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF483Q8TF39 744 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 C16orf78Q8WTQ4 265 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 CPNE4Q96A23 557 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 REXO5Q96IC2 774 aaKnown RBP10.05□□□□□ -0.8
BRCA1-213ENST00000476777 RADILQ96JH8 1075 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 DHRS9Q9BPW9 319 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 SHCBP1LQ9BZQ2 653 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 GP6Q9HCN6 339 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 TMCO1Q9UM00 188 aa10.05□□□□□ -0.8
BRCA1-213ENST00000476777 LOC100289279A0A1B0GTE1 492 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 CCDC188H7C350 402 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 H7C417 338 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 MANBAO00462 879 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 SPRY1O43609 319 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 EFNA2O43921 213 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 PRKD3O94806 890 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 RBP1P09455 135 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 CSF3P09919 207 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 TYK2P29597 1187 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 SFTPDP35247 375 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF41P51814 821 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 MANFP55145 182 aaKnown RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 SLC18A2Q05940 514 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 SQLEQ14534 574 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ZNHIT3Q15649 155 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 FCRLAQ7L513 359 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 CDYL2Q8N8U2 506 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 GATSQ8NAP1 163 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 OR4C3Q8NH37 302 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 MSI2Q96DH6 328 aaKnown RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 MUCL1Q96DR8 90 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ELP4Q96EB1 424 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 APIPQ96GX9 242 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 C1orf159Q96HA4 380 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ERP44Q9BS26 406 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ACPTQ9BZG2 426 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 VPS11Q9H270 941 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 HHATLQ9HCP6 504 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 TIGARQ9NQ88 270 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 DDX18Q9NVP1 670 aaKnown RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 GRHL1Q9NZI5 618 aa10.04□□□□□ -0.8
BRCA1-213ENST00000476777 ING1Q9UK53 422 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-213ENST00000476777 VWC2LB2RUY7 222 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SMIM24O75264 130 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 OR4F21O95013 312 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 KCNH1O95259 989 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 PGM3O95394 542 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 OXSR1O95747 527 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 NGFRP08138 427 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms