RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NAGAP17050 411 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 OTX2P32243 289 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 DLSTP36957 453 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 IFNGR2P38484 337 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 STAT5AP42229 794 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 GPR143P51810 404 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 ST3GAL3Q11203 375 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 MED21Q13503 144 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 FGD3Q5JSP0 725 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 DCST1Q5T197 706 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 PDZK1Q5T2W1 519 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 MRPL2Q5T653 305 aaKnown RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 PLEKHM3Q6ZWE6 761 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 RRM2BQ7LG56 351 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 LSM14AQ8ND56 463 aaKnown RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 APOBEC4Q8WW27 367 aaKnown RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 ZG16BQ96DA0 208 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 OMA1Q96E52 524 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 IP6K3Q96PC2 410 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 MCHR1Q99705 422 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 WDR77Q9BQA1 342 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 KRCC1Q9NPI7 259 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 USE1Q9NZ43 259 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 SELENONQ9NZV5 590 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 TESQ9UGI8 421 aaKnown RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 ENOPH1Q9UHY7 261 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 LRCH1Q9Y2L9 728 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 NPIPA5A0A0B4J1W7 369 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 PMS2P1A4D2B8 440 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 SERINC4A6NH21 518 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 NPIPA7E9PJI5 369 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 GTPBP1O00178 669 aaKnown RBP11.27□□□□□ -0.61
MRPL55-227ENST00000475832 FAAHO00519 579 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 OR5F1O95221 314 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 UTS2O95399 124 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 CSTAP01040 98 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 NPIPA8P0DM63 369 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 THRBP10828 461 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ANXA8P13928 327 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TBXA2RP21731 343 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 HMGA2P52926 109 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 FOXL2P58012 376 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 COPZ1P61923 177 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 RPP38P78345 283 aaKnown RBP11.27□□□□□ -0.61
MRPL55-227ENST00000475832 FGFBP1Q14512 234 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TRAM2Q15035 370 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 PCOLCEQ15113 449 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 MAPK14Q16539 360 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 MICAQ29983 383 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 IQCCQ4KMZ1 466 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 PLAG1Q6DJT9 500 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 EPHX4Q8IUS5 362 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 CLIP4Q8N3C7 705 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 DHRSXQ8N5I4 330 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 SLC15A4Q8N697 577 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 IL22RA1Q8N6P7 574 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF441Q8N8Z8 693 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 APCDD1LQ8NCL9 501 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF555Q8NEP9 628 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 OR10G2Q8NGC3 310 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 OR6T1Q8NGN1 323 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 OR52J3Q8NH60 311 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 SLC38A4Q969I6 547 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TMCO6Q96DC7 493 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 NAF1Q96HR8 494 aaKnown RBP11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ALPK1Q96QP1 1244 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ADOQ96SZ5 270 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 SLC29A1Q99808 456 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ZNF559Q9BR84 538 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TRIM2Q9C040 744 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 ANKRD19PQ9H560 264 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 NMNAT1Q9HAN9 279 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-227ENST00000475832 TMEM27Q9HBJ8 222 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 RPS6KB2Q9UBS0 482 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 HS3ST3B1Q9Y662 390 aa11.27□□□□□ -0.61
MRPL55-227ENST00000475832 SPTBP11277 2137 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 A0A087WV48 116 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 A0A1W2PQ72 361 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 A0A1W2PRQ8 180 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 CDC14CA4D256 554 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 PRAMEF25A6NGN4 478 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 OR6C70A6NIJ9 312 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 J3KTA2 159 aa11.26□□□□□ -0.61
MRPL55-227ENST00000475832 PPM1BO75688 479 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms