RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ZNF781Q8N8C0 355 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 ACTRT2Q8TDY3 377 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 ZNF524Q96C55 264 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 TUBGCP3Q96CW5 907 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 SORT1Q99523 831 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 OPN3Q9H1Y3 402 aaPredicted RBP16.68■□□□□ 0.26
COL7A1-209ENST00000474432 MED17Q9NVC6 651 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 ASIC5Q9NY37 505 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 RAB21Q9UL25 225 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 TESMINQ9Y4I5 508 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 SNX8Q9Y5X2 465 aa16.68■□□□□ 0.26
COL7A1-209ENST00000474432 A0A087WZY1 265 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 WDR91A4D1P6 747 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 NPIPB9F8W1W9 429 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 SIAH2O43255 324 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 EFNA2O43921 213 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 IL11P20809 199 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 PRPS1L1P21108 318 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 CCKARP32238 428 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 CLDN8P56748 225 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 HBA1P69905 142 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 SIRPAP78324 504 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL7A1-209ENST00000474432 PAMR1Q6UXH9 720 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 CNEP1R1Q8N9A8 125 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 JADE3Q92613 823 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 PGM2Q96G03 612 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 SH3YL1Q96HL8 342 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-209ENST00000474432 TMUB1Q9BVT8 246 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 ACTRT3Q9BYD9 372 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 BHLHE41Q9C0J9 482 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-209ENST00000474432 SERHL2Q9H4I8 314 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 SSU72Q9NP77 194 aaKnown RBP16.67■□□□□ 0.26
COL7A1-209ENST00000474432 HEATR5AQ86XA9 2040 aa16.67■□□□□ 0.26
COL7A1-209ENST00000474432 NPIPA5A0A0B4J1W7 369 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 NPIPA7E9PJI5 369 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ADAMDEC1O15204 470 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 BIRC5O15392 142 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 SMNDC1O75940 238 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL7A1-209ENST00000474432 GOSR1O95249 250 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 OPN1LWP04000 364 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 SERPINE1P05121 402 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 LINGO3P0C6S8 592 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 NPIPA8P0DM63 369 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 NID1P14543 1247 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 DDX5P17844 614 aaKnown RBP16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ABCE1P61221 599 aaKnown RBP16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ZNF117Q03924 483 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 TP53BP2Q13625 1128 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 POU4F3Q15319 338 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 KLHL26Q53HC5 615 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 CBLN3Q6UW01 205 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 C22orf34Q6ZV56 151 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 NATD1Q8N6N6 113 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 OR56A1Q8NGH5 318 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 SFXN5Q8TD22 340 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ZBTB9Q96C00 473 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 MBD6Q96DN6 1003 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 RNF145Q96MT1 663 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 WFIKKN1Q96NZ8 548 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ZIM3Q96PE6 472 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 DUSP26Q9BV47 211 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 AKTIPQ9H8T0 292 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 ATAD3AQ9NVI7 634 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 HAO1Q9UJM8 370 aa16.66■□□□□ 0.26
COL7A1-209ENST00000474432 NF1P21359 2839 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 A0A0J9YW62 118 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 EIF1AYO14602 144 aaKnown RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 RGS16O15492 202 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 SCN2BO60939 215 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 ATE1O95260 518 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 HSPA4LO95757 839 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 CD8BP10966 210 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 SHC1P29353 583 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 CPOXP36551 454 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 CD79BP40259 229 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 RNF144AP50876 292 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 RPS3AP61247 264 aaKnown RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 RAC1P63000 192 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 PHC1P78364 1004 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 PDCD2Q16342 344 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 SMU1Q2TAY7 513 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 LSM12Q3MHD2 195 aaKnown RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 DCST2Q5T1A1 773 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 MISPQ8IVT2 679 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 CLECL1Q8IZS7 167 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 ZNF610Q8N9Z0 462 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 OR10D3Q8NH80 312 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 OR5AK3PQ8NH89 298 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 B4GALNT2Q8NHY0 566 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 ZBTB8AQ96BR9 441 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 PPP1R36Q96LQ0 422 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 ICAM5Q9UMF0 924 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
COL7A1-209ENST00000474432 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
COL7A1-209ENST00000474432 PRR14LQ5THK1 2151 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 SCDO00767 359 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 ANKRD28O15084 1053 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms