RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PGAM5Q96HS1 289 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KLHL32Q96NJ5 620 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 AGAP4Q96P64 663 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SORCS2Q96PQ0 1159 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 IL12RB2Q99665 862 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ARHGAP9Q9BRR9 750 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MYL10Q9BUA6 226 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FSCN3Q9NQT6 498 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 VNN3Q9NY84 501 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 DENND4AQ7Z401 1863 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ABCC10Q5T3U5 1492 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MYH6P13533 1939 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PLCH2O75038 1416 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMEM233B4DJY2 109 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 C9J4A7 227 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TGFBR3LH3BV60 316 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PPP6CO00743 305 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TNFRSF10CO14798 259 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SH3BGRLO75368 114 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RGS11O94810 467 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 AP2A2O94973 939 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR4F21O95013 312 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PSMG1O95456 288 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CBX7O95931 251 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MT-CYBP00156 380 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 FTH1P02794 183 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 G6PDP11413 515 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF23P17027 643 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF28P17035 718 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TPH1P17752 444 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CXCR1P25024 350 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MARK3P27448 753 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ADORA1P30542 326 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KCNQ1P51787 676 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SLC16A1P53985 500 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SNRPEP62304 92 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 TLE4Q04727 773 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EGR4Q05215 589 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FPGSQ05932 587 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TWF1Q12792 350 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZP4Q12836 540 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TNK1Q13470 666 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RUNX2Q13950 521 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KCTD19Q17RG1 926 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 FBLN7Q53RD9 439 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MFSD14BQ5SR56 506 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF770Q6IQ21 691 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 RNASEKQ6P5S7 137 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 RAD9BQ6WBX8 426 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF620Q6ZNG0 422 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CTAGE3PQ8IX95 158 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF444Q8N0Y2 327 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 CISD2Q8N5K1 135 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF610Q8N9Z0 462 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 LRRC75AQ8NAA5 344 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FBXO36Q8NEA4 188 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR51D1Q8NGF3 324 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR52N4Q8NGI2 321 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR9A4Q8NGU2 314 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GNPDA2Q8TDQ7 276 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GPR151Q8TDV0 419 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SUSD6Q92537 303 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR52B2Q96RD2 323 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TTYH2Q9BSA4 534 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TPSD1Q9BZJ3 242 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SEC31BQ9NQW1 1179 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 C14orf105Q9NVL8 296 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 LYARQ9NX58 379 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 HEY2Q9UBP5 337 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EBF1Q9UH73 591 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 AMDHD2Q9Y303 409 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CACNA1SQ13698 1873 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRR36Q9H6K5 1346 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CDC42BPAQ5VT25 1732 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 A0A1B0GUS0 222 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RPS10-NUDT3A0A1W2PQS6 291 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF785A8K8V0 405 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 METTL12A8MUP2 240 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PEX12O00623 359 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RFXANKO14593 260 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TNFRSF13BO14836 293 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 PPIHO43447 177 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 SC5DO75845 299 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CEACAM4O75871 244 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RCBTB2O95199 551 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 NDUFA10O95299 355 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRAMEF1O95521 474 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GCP02774 474 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 HAPLN1P10915 354 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 PGAM1P18669 254 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CA4P22748 312 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KLRC2P26717 231 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SOAT1P35610 550 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 BCL6P41182 706 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RAB28P51157 221 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EFNA5P52803 228 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 WDR4P57081 412 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms