RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PHC1P78364 1004 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SNTB1Q13884 538 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 CASP8Q14790 479 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 DPY19L1Q2PZI1 675 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SPATA19Q7Z5L4 167 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 MTERF4Q7Z6M4 381 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 KIF18BQ86Y91 864 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 WDR75Q8IWA0 830 aaKnown RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 ZNF527Q8NB42 609 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 OR4A15Q8NGL6 344 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SH3YL1Q96HL8 342 aaPredicted RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 OR7D2Q96RA2 312 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 SFXN3Q9BWM7 321 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 WDR55Q9H6Y2 383 aaPredicted RBP10.09□□□□□ -0.79
CKS1B-206ENST00000474215 VDAC3Q9Y277 283 aa10.09□□□□□ -0.79
CKS1B-206ENST00000474215 CREBBPQ92793 2442 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ARHGAP21Q5T5U3 1957 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 GOLGA8QA0A0J9YX86 632 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 RNF103-CHMP3A0A140T963 221 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 C7orf72A4D263 438 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 GOLGA8OA6NCC3 632 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 SHISA8B8ZZ34 492 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 NPIPB9F8W1W9 429 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 GOLGA8NF8WBI6 632 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 H0YC42 278 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 H3BNH8 94 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 SEC14L5O43304 696 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 CPSF4O95639 269 aaKnown RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 CRHP06850 196 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ALDOCP09972 364 aaKnown RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 KITP10721 976 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ZNF17P17021 662 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 UQCRC2P22695 453 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 EPHA3P29320 983 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 S100A3P33764 101 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ATP12AP54707 1039 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 TPD52P55327 224 aaPredicted RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 RPS26P62854 115 aaKnown RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 OCRLQ01968 901 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 CD226Q15762 336 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 SPANXN4Q5MJ08 99 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 AGBL2Q5U5Z8 902 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 OR2A2Q6IF42 318 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 P4HA3Q7Z4N8 544 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ANKRD46Q86W74 232 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 GCNT2Q8N0V5 402 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 CLEC4FQ8N1N0 589 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 GTPBP8Q8N3Z3 284 aaPredicted RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 OR5D16Q8NGK9 328 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 B4GALNT2Q8NHY0 566 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 PHOSPHO1Q8TCT1 267 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 MIPOL1Q8TD10 442 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ZBTB8AQ96BR9 441 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 SDF2Q99470 211 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 PINK1Q9BXM7 581 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 PIGMQ9H3S5 423 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 MED17Q9NVC6 651 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 AIG1Q9NVV5 245 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 MARCOQ9UEW3 520 aaPredicted RBP10.08□□□□□ -0.8
CKS1B-206ENST00000474215 ZNF175Q9Y473 711 aa10.08□□□□□ -0.8
CKS1B-206ENST00000474215 MED12Q93074 2177 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 NPIPA5A0A0B4J1W7 369 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 A0A1W2PNV4 684 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 E9PBE3 544 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 NPIPA7E9PJI5 369 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 GTPBP1O00178 669 aaKnown RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 KLF11O14901 512 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 STX11O75558 287 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 TNFSF13O75888 250 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 AGR2O95994 175 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 AK1P00568 194 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 NPIPA8P0DM63 369 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 PSMA4P25789 261 aaKnown RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 NME5P56597 212 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 RPS3AP61247 264 aaKnown RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 UFM1P61960 85 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 ZNF117Q03924 483 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 SGCBQ16585 318 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 PLPPR5Q32ZL2 321 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 FAM174BQ3ZCQ3 159 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 GGNQ86UU5 652 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 CHDHQ8NE62 594 aaPredicted RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 FAM222BQ8WU58 562 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 SMPDL3BQ92485 455 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 FIG4Q92562 907 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 ZNF75CPQ92670 426 aaPredicted RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 SLC35G5Q96KT7 338 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 RBM24Q9BX46 236 aaKnown RBP10.07□□□□□ -0.8
CKS1B-206ENST00000474215 SERHL2Q9H4I8 314 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 EXD2Q9NVH0 621 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 CRIM1Q9NZV1 1036 aa10.07□□□□□ -0.8
CKS1B-206ENST00000474215 BTNL2Q9UIR0 455 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms