RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 FUT1P19526 365 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 ALDH6A1Q02252 535 aaKnown RBP16.61■□□□□ 0.25
VARS2-206ENST00000473916 DECR1Q16698 335 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 GPR107Q5VW38 600 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 SLX4IPQ5VYV7 408 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 C12orf73Q69YU5 71 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 CD300LDQ6UXZ3 194 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 PTCHD4Q6ZW05 846 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 C9orf40Q8IXQ3 194 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 CACTIN-AS1Q8N1I8 211 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 DEPDC4Q8N2C3 294 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 GATSQ8NAP1 163 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 OR13F1Q8NGS4 319 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 PFN4Q8NHR9 129 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 GRHL3Q8TE85 626 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 GPR83Q9NYM4 423 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 RSL24D1Q9UHA3 163 aaKnown RBP16.61■□□□□ 0.25
VARS2-206ENST00000473916 SNX5Q9Y5X3 404 aa16.61■□□□□ 0.25
VARS2-206ENST00000473916 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 FADS2O95864 444 aaKnown RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 ZNF141Q15928 474 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 NKAIN1Q4KMZ8 207 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ACSM5Q6NUN0 579 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 NR4A3Q92570 626 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 GGHQ92820 318 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ANKRD19PQ9H560 264 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 AKIRIN1Q9H9L7 192 aaPredicted RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 PSORS1C1Q9UIG5 152 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 COL27A1Q8IZC6 1860 aaPredicted RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 KPNA4O00629 521 aaPredicted RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 CDC42EP2O14613 210 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 CNOT3O75175 753 aaKnown RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 ADRA2AP08913 450 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ZGLP1P0C6A0 271 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 C21orf33P30042 268 aaPredicted RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 AVPR2P30518 371 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ACAA2P42765 397 aaKnown RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 ATP12AP54707 1039 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 GP2P55259 537 aaKnown RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 FGFBP1Q14512 234 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 FAM69BQ5VUD6 431 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 CCDC81Q6ZN84 652 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 LINC00471Q8N535 108 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 POGLUT1Q8NBL1 392 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 PIGXQ8TBF5 258 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 GNPDA2Q8TDQ7 276 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 FAR1Q8WVX9 515 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 MUL1Q969V5 352 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 PMEPA1Q969W9 287 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ADIPOR1Q96A54 375 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 ISOC1Q96CN7 298 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 SIGLEC11Q96RL6 698 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 MYCBPQ99417 103 aaPredicted RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 G6PC3Q9BUM1 346 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 C20orf141Q9NUB4 165 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 TESQ9UGI8 421 aaKnown RBP16.6■□□□□ 0.25
VARS2-206ENST00000473916 IL20RAQ9UHF4 553 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 R4GN57 208 aa16.6■□□□□ 0.25
VARS2-206ENST00000473916 NTN3O00634 580 aaPredicted RBP16.59■□□□□ 0.25
VARS2-206ENST00000473916 RGS10O43665 173 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 SEC14L2O76054 403 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 IFNA8P32881 189 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 RORAP35398 523 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 PEX19P40855 299 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 BIKQ13323 160 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 GINS1Q14691 196 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 ZNF528Q3MIS6 628 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 CLEC12AQ5QGZ9 265 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 MBOAT2Q6ZWT7 520 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 RRM2BQ7LG56 351 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 PMM1Q92871 262 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 SLC46A1Q96NT5 459 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 TVP23BQ9NYZ1 205 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 DNAJC27Q9NZQ0 273 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 MPDZO75970 2070 aa16.59■□□□□ 0.25
VARS2-206ENST00000473916 EFCAB7A8K855 629 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 KLF4O43474 513 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 PRKYO43930 277 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 ENTPD6O75354 484 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 SOX30O94993 753 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 PPICP45877 212 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 COX10Q12887 443 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 TSPAN31Q12999 210 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 EBPQ15125 230 aaKnown RBP16.58■□□□□ 0.25
VARS2-206ENST00000473916 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.58■□□□□ 0.25
VARS2-206ENST00000473916 ZNF385CQ66K41 422 aaPredicted RBP16.58■□□□□ 0.25
VARS2-206ENST00000473916 COPS4Q9BT78 406 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 VCX3AQ9NNX9 186 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 ATP13A2Q9NQ11 1180 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 KMT2EQ8IZD2 1858 aa16.58■□□□□ 0.25
VARS2-206ENST00000473916 A0A1B0GWA3 101 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 LNP1A1A4G5 178 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 OIP5O43482 229 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 GUSBP08236 651 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 ZNF28P17035 718 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 MLLT10P55197 1068 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 CD226Q15762 336 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 APOOLQ6UXV4 268 aa16.58■□□□□ 0.24
VARS2-206ENST00000473916 PPP1R3BQ86XI6 285 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms