RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SH3YL1Q96HL8 342 aaPredicted RBP20.34■□□□□ 0.85
PTP4A1-203ENST00000473334 SLC35G5Q96KT7 338 aa20.34■□□□□ 0.85
PTP4A1-203ENST00000473334 HOXD1Q9GZZ0 328 aa20.34■□□□□ 0.85
PTP4A1-203ENST00000473334 JKAMPQ9P055 326 aa20.34■□□□□ 0.85
PTP4A1-203ENST00000473334 MARCOQ9UEW3 520 aaPredicted RBP20.34■□□□□ 0.85
PTP4A1-203ENST00000473334 PRSS51A0A1B0GVH4 220 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 TRPC5OSA6NMA1 111 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SHISA8B8ZZ34 492 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SCN2BO60939 215 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 TGM6O95932 706 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 ALDOCP09972 364 aaKnown RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 KITP10721 976 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 MATN1P21941 496 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 KIR2DL3P43628 341 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 ZNF41P51814 821 aaPredicted RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SUCLG1P53597 346 aaKnown RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 RPS26P62854 115 aaKnown RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SNTB1Q13884 538 aaKnown RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 CD226Q15762 336 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 FLYWCH1Q4VC44 716 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SPANXN4Q5MJ08 99 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SPATA19Q7Z5L4 167 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 MTERF4Q7Z6M4 381 aaKnown RBP20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 B4GALNT2Q8NHY0 566 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 ACTRT2Q8TDY3 377 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SMPDL3BQ92485 455 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 ZBTB8AQ96BR9 441 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 SERHL2Q9H4I8 314 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 MANSC1Q9H8J5 431 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 AIG1Q9NVV5 245 aa20.33■□□□□ 0.85
PTP4A1-203ENST00000473334 NPIPA5A0A0B4J1W7 369 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 SLC22A20A6NK97 555 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 DUXAA6NLW8 204 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 E9PBE3 544 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 NPIPA7E9PJI5 369 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 SLCO1B7G3V0H7 640 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 H0YC42 278 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 TNFRSF21O75509 655 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 NPIPA8P0DM63 369 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 ATP12AP54707 1039 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 TPD52P55327 224 aaPredicted RBP20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 CLDN20P56880 219 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 RPS3AP61247 264 aaKnown RBP20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 EEF1A1P68104 462 aaKnown RBP20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 PHC1P78364 1004 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 OCRLQ01968 901 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 PLPPR5Q32ZL2 321 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 AGBL2Q5U5Z8 902 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 EEF1A1P5Q5VTE0 462 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 OR2A2Q6IF42 318 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 ANKRD46Q86W74 232 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 WDR75Q8IWA0 830 aaKnown RBP20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 CLEC4FQ8N1N0 589 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 GTPBP8Q8N3Z3 284 aaPredicted RBP20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 PHOSPHO1Q8TCT1 267 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 PINK1Q9BXM7 581 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 MED17Q9NVC6 651 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 STOML1Q9UBI4 398 aa20.32■□□□□ 0.84
PTP4A1-203ENST00000473334 C7orf72A4D263 438 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 H3BNH8 94 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 CPSF4O95639 269 aaKnown RBP20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 AK1P00568 194 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 UQCRC2P22695 453 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 EPHA3P29320 983 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 FAM174BQ3ZCQ3 159 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 KLHL26Q53HC5 615 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 TMEM200AQ86VY9 491 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 KIF18BQ86Y91 864 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 ZZZ3Q8IYH5 903 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 METTL25Q8N6Q8 603 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 CHDHQ8NE62 594 aaPredicted RBP20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 SDF2Q99470 211 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 PIGMQ9H3S5 423 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 WDR55Q9H6Y2 383 aaPredicted RBP20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 CRIM1Q9NZV1 1036 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 ZNF175Q9Y473 711 aa20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 ANKHD1Q8IWZ3 2542 aaKnown RBP20.31■□□□□ 0.84
PTP4A1-203ENST00000473334 OTOGQ6ZRI0 2925 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 GOLGA8QA0A0J9YX86 632 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 A0A1W2PNV4 684 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 GOLGA8OA6NCC3 632 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 NPIPB9F8W1W9 429 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 GOLGA8NF8WBI6 632 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 CRHP06850 196 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 S100A3P33764 101 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 NME5P56597 212 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 UFM1P61960 85 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 SORDQ00796 357 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 ZNF117Q03924 483 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 GGNQ86UU5 652 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 MIPOL1Q8TD10 442 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 FIG4Q92562 907 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 TEX37Q96LM6 180 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 NPAS1Q99742 590 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 POLQO75417 2590 aa20.3■□□□□ 0.84
PTP4A1-203ENST00000473334 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.29■□□□□ 0.84
PTP4A1-203ENST00000473334 KLF11O14901 512 aa20.29■□□□□ 0.84
PTP4A1-203ENST00000473334 TNFSF13O75888 250 aa20.29■□□□□ 0.84
PTP4A1-203ENST00000473334 LUZP2Q86TE4 346 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms