RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 DNAJB5O75953 348 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 FASP25445 335 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 HLCSP50747 726 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 RPP38P78345 283 aaKnown RBP17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 GK3PQ14409 553 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 NPTX1Q15818 432 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 DESI1Q6ICB0 168 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 HMGN2P46Q86SG4 172 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 LACC1Q8IV20 430 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 SPACA3Q8IXA5 215 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 ZNF440Q8IYI8 595 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 TOR1AIP2Q8NFQ8 470 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 OR6T1Q8NGN1 323 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 GRHL3Q8TE85 626 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 ASB15Q8WXK1 588 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 NR4A3Q92570 626 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 NODALQ96S42 347 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 RNF32Q9H0A6 362 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 ING2Q9H160 280 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 DNAJB9Q9UBS3 223 aa17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 NKX1-2Q9UD57 310 aaPredicted RBP17.81■□□□□ 0.44
CHMP2B-204ENST00000472024 ANKRD33BA6NCL7 494 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 H3BNH8 94 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 FAAHO00519 579 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 CASQ2O14958 399 aaPredicted RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 EIF4E2O60573 245 aaKnown RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 BCAS1O75363 584 aaPredicted RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 DEAF1O75398 565 aaPredicted RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 TIPRLO75663 272 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 RHCEP18577 417 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 TNFRSF1BP20333 461 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 ITGA3P26006 1051 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 PTGDSP41222 190 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 OR1E2P47887 323 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 SLC34A1Q06495 639 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 SKP2Q13309 424 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 CD226Q15762 336 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 B3GNTL1Q67FW5 361 aaPredicted RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 FCRLBQ6BAA4 426 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 HMBOX1Q6NT76 420 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 SIRT6Q8N6T7 355 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 OR10G3Q8NGC4 313 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 CNOT9Q92600 299 aaKnown RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 PKP2Q99959 881 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 LAT2Q9GZY6 243 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 CPNE5Q9HCH3 593 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 RLIMQ9NVW2 624 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 TESQ9UGI8 421 aaKnown RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 SLC13A4Q9UKG4 626 aa17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 CNOT11Q9UKZ1 510 aaKnown RBP17.8■□□□□ 0.44
CHMP2B-204ENST00000472024 H0Y3Z8 333 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 M0R3H8 397 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 CLOCKO15516 846 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 TPST2O60704 377 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 LDLRP01130 860 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 PRKAR1AP10644 381 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 HPGDP15428 266 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 FBXW10Q5XX13 1052 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 IGFL2Q6UWQ7 119 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 RTL4Q6ZR62 310 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 ZNF550Q7Z398 422 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 ZNF227Q86WZ6 799 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 RBM45Q8IUH3 476 aaKnown RBP17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 BEST3Q8N1M1 668 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 LRTOMTQ8WZ04 291 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 CENPNQ96H22 339 aaPredicted RBP17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 RTN4RQ9BZR6 473 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 NTN4Q9HB63 628 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 CNIH4Q9P003 139 aa17.79■□□□□ 0.44
CHMP2B-204ENST00000472024 CSTAP01040 98 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 UBL4AP11441 157 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 GCKP35557 465 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 CASP3P42574 277 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ACAA2P42765 397 aaKnown RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 CLK3P49761 638 aaKnown RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 HMGA2P52926 109 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 DLX5P56178 289 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 RGS8P57771 180 aaPredicted RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 TLE3Q04726 772 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ZNF468Q5VIY5 522 aaPredicted RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ABHD17BQ5VST6 288 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 OR2T5Q6IEZ7 315 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 TMEM156Q8N614 296 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 LSMEM1Q8N8F7 131 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 PIK3C3Q8NEB9 887 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 OR2T29Q8NH02 315 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 SNRNP27Q8WVK2 155 aaKnown RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ARSGQ96EG1 525 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 PRRC1Q96M27 445 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 PIP5K1AQ99755 562 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ANGPTL4Q9BY76 406 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 TBL1XR1Q9BZK7 514 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ZNF552Q9H707 407 aaPredicted RBP17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 HPF1Q9NWY4 346 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 STMN3Q9NZ72 180 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 ABI3Q9P2A4 366 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 A4GNTQ9UNA3 340 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 KCNMB2Q9Y691 235 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 NINQ8N4C6 2090 aa17.78■□□□□ 0.44
CHMP2B-204ENST00000472024 hCG_2039718K7EN88 272 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms